[PyMOL] pymol -M ?

[William Scott]

Hi Mark:

I just tried the command with -M and it didn't help, but for the  
record, you can use


/Applications/MacPyMOL.app/Contents/MacOS/MacPyMOL


or if you are a nerd, you might prefer this shell script, which you  
can call pymol and put in your $path array.  It finds wherever you  
put it, figures out what version you are using, launches it, and puts  
the word pymol in your titlebar or tab of the terminal (or iTerm),  
and whines appropriately if it doesn't work:


#!/bin/zsh -f
getargs=("$@")

if [[ -x /usr/bin/mdfind ]];then
    pymolprefix=($( mdfind MacPyMOL | grep MacPyMOL.app | head -1  ))
else
    pymolprefix=($( locate MacPyMOL.app | head -1 ))
fi

if [[ -x $pymolprefix/Contents/MacOS/PyMOL ]];then
    pymolexec=($pymolprefix/Contents/MacOS/PyMOL)
elif [[ -x $pymolprefix/Contents/MacOS/MacPyMOL ]];then
    pymolexec=($pymolprefix/Contents/MacOS/MacPyMOL)
else
    pymolexec=""
fi


pymolparser=($pymolprefix/pymol/modules/pymol/parser.py )

if [[ -z $pymolprefix ]];then
    print "Can\'t locate MacPyMol in locatedatabase"
    print "If you have MacPyMol, issue sudo /etc/weekly to get this  
to work"
    print "Trying now with X-windows based version..."
    pymolexec='command pymol'
fi

natpymol () {

        $pymolexec -q $getargs
}

# function to settab to show pymol running and then reset with settab

function pymoltab {
    echo -ne "\e]1; pymol \a"; natpymol; settab
}

pymoltab


=================


Hope NYC is treating you well.



Bill