Donald, Strange! Try making sure that you are running in "millions" of colors mode in the Display settings of System Preferences. If that doesn't solve your problem, then try the latest beta version http://delsci.com/beta to see if the problem still exists with the current code.
Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster Point Blvd., Suite 213 . South San Francisco, CA 94080 USA . Biz:(650)-872-0942 Tech:(650)-872-0834 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:war...@delsci.com > -----Original Message----- > From: pymol-users-ad...@lists.sourceforge.net > [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of > Don Ronning > Sent: Friday, September 09, 2005 1:14 PM > To: Pymol List-Serve > Subject: [PyMOL] Atom name and actual atom not consistent > > Hi all > > I just installed MacPyMOL 0.98 on a G5. PyMOL draws the > protein correctly and colors the atoms correctly. However, > when I click on an atom, say a backbone N, Pymol thinks I > just clicked on the carbonyl carbon. It is difficult to draw > H-bonds this way, because the bond is made with the carbonyl > carbon instead of the nitrogen. Any ideas about how to fix > this. Can I go back to an older version to avoid this? Thanks > in advance. > > -- > Dr. Donald Ronning > Assistant Professor > University of Toledo > Department of Chemistry > 2801 W. Bancroft St. > Wolfe Hall 4207B > Toledo, OH 43606 > Phone: 419 530-1591 > Fax: 419 530-4033 > e-mail: donald.ronn...@utoledo.edu > > > > > > > ------------------------------------------------------- > SF.Net email is Sponsored by the Better Software Conference & > EXPO September 19-22, 2005 * San Francisco, CA * Development > Lifecycle Practices Agile & Plan-Driven Development * > Managing Projects & Teams * Testing & QA Security * Process > Improvement & Measurement * http://www.sqe.com/bsce5sf > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > >
