Dr. Delano, Thank you for the information.
--- Warren DeLano <war...@delanoscientific.com> wrote: > Douglas, > > It is the molecular or "Connolly" surface: the > surface that would be traced > out by the *surfaces* of waters in contact with the > protein at all possible > positions. > > There's nothing in PyMOL that would allow you to > measure dimensions on the > surface, but you could drag atoms around from > another object and then > measure the distance between those translated atoms. > > Cheers, > Warren > > > -- > Warren L. DeLano, Ph.D. > Principal Scientist > > . DeLano Scientific LLC > . 400 Oyster Point Blvd., Suite 213 > . South San Francisco, CA 94080 USA > . Biz:(650)-872-0942 Tech:(650)-872-0834 > . Fax:(650)-872-0273 Cell:(650)-346-1154 > . mailto:war...@delsci.com > > > > -----Original Message----- > > From: pymol-users-ad...@lists.sourceforge.net > > [mailto:pymol-users-ad...@lists.sourceforge.net] > On Behalf Of > > Douglas McKinney > > Sent: Thursday, June 09, 2005 3:14 PM > > To: pymol-users@lists.sourceforge.net > > Subject: [PyMOL] "show surface" and the "get_view" > cmd > > > > I need to know what surface the "show surface" > command shows. > > Is it the molecular surface, surface > accessibility, etc. I > > didn't see anything in the documentation or wiki > that sheds > > light on this information. > > > > Also, I need to know how to interpret the > dimensions of the > > molecule from one point on the surface to another > point of > > the surface. > > > > Thank you. > > > > > > > > __________________________________ > > Discover Yahoo! > > Have fun online with music videos, cool games, IM > and more. > > Check it out! > > http://discover.yahoo.com/online.html > > > > > > > ------------------------------------------------------- > > This SF.Net email is sponsored by: NEC IT Guy > Games. How far > > can you shotput > > a projector? How fast can you ride your desk chair > down the > > office luge track? > > If you want to score the big prize, get to know > the little guy. > > Play to win an NEC 61" plasma display: > http://www.necitguy.com/?r=20 > > _______________________________________________ > > PyMOL-users mailing list > > PyMOL-users@lists.sourceforge.net > > > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > > > __________________________________ Discover Yahoo! Have fun online with music videos, cool games, IM and more. Check it out! http://discover.yahoo.com/online.html
