Hi Kostas,
What you need to do is create a new object based on the part you wish to
view, then centre the view on that object.
select objectName, resi 1-55
center objectName
alternatively use the 'zoom' command instead of 'center'.
As for treating models of an NMR ensemble seperately use the
split_states command:
split_states pdbName
Hope this helps,
Jules
Kostas Tripsianes wrote:
>
> Dear Fellows
>
> I have subscribed months now to your list which I found very
interesting and powerful as PyMol itself. I admit that I am a beginner
and I would like to post my problem to the "expert PyMol society".
Because of computational needs my PDB contains a linker and when I load
it cause me problems with the object movement eventhough I deliberately
don't display it. If I delete the linker sequence from my PDB I cannot
load it. Any suggestion about that. In case that's impossible how can I
shift the mass center or recalculated based on what I want to display.
And something else. How can I handle the models of an ensemble
separately?????????????
> Thanks in advance.
> --
>
> ------------------------------------------------------------------------
>
> Kostas Tripsianes, PhD student
> Bijvoet Center for Biomolecular Research
> NMR Spectroscopy, Utrecht University
> Padualaan 8, 3584 CH Utrecht, The Netherlands
> _kos...@nmr.chem.uu.nl_
> phone: +31-30-2532875
> fax: +31-30-2537623
> :-)
