Here's my question: I've used the PyMOL "dist" command to make H-bond dashes between a small molecule (I called it peng) and my protein.
dist hbonds, (peng and elem o+n),(not peng and elem o+n),3.2 This worked great except it made one H-bond between 2 carbonyl oxygens. I'd like to delete the dashes for just this bond, but don't know how to select specifically it from the group selection "hbonds" so that I don't erase all the H-bonds in the group. It would be a pain to have to specify each H-bond separately. Any ideas? - Mark
