Hi,
I have loaded 3 pdb files of homologous forms of an enzyme. The 'fit' command works for superimposing/aligning two of them, but the third file always gives a No Atoms Selected error. Is there something in the pdb file I can fix? As a general rule now, I Hide Everything at first and then Show Lines as I begin with a new PyMOL session. I can see all three molecules, just can't align the third one (EcHRSade) with the first two (TtHisRS and SaHRS).

PyMOL>fit TtHisRS, SaHRS
 Executive: RMS =    4.222 (718 to 718 atoms)

PyMOL>fit TtHisRS, EcHRSade
ExecutiveRMS-Error: No atoms selected.
PyMOL>fit EcHRSade, TtHisRS
ExecutiveRMS-Error: No atoms selected.
PyMOL>fit EcHRSade, SaHRS
ExecutiveRMS-Error: No atoms selected.

Thanks,
--Michael


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