Hi folks:

I just installed the new pymol 0.91 for os x.

I used to start pymol this way:

alias pymol "/Applications/PyMOL/Darwin/pymol.com -q /Users/wgscott/pymol/alias.pml"

Now that option appears to be gone, so I tried


alias pymol "open -a /Applications/PyMOL.app /Users/wgscott/pymol/alias.pml"

open -a /Applications/PyMOL.app

by itself works, as does

open -a /Applications/PyMOL.app foo.pdb

but open -a /Applications/PyMOL.app bar.pml

doesn't seem to allow me to read in a pymol script.


Is there some new argument flag I have to add or what?

Thanks.

Bill


William G. Scott

Associate Professor
Department of Chemistry and Biochemistry
and The Center for the Molecular Biology of RNA
Sinsheimer Laboratories
University of California at Santa Cruz
Santa Cruz, California 95064
USA

phone:  +1-831-459-5367 (office)
               +1-831-459-5292 (lab)
fax:         +1-831-4593139  (fax)
url:          http://chemistry.ucsc.edu/~wgscott/




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