Jason,
In version 0.90, there is a ribbon_trace setting which allows
you to do this for the ribbon representation. In versions 0.91+, I've
added the same thing for cartoons "cartoon_trace".
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
> -----Original Message-----
> From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-
> ad...@lists.sourceforge.net] On Behalf Of Jason Thomas Maynes
> Sent: Wednesday, July 09, 2003 10:30 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] ca trace
>
> Hello:
>
> I think this was asked before but the list archives are down:
>
> If I have a pdb of Ca's only, is there a way to trace through them
without
> iteratively bonding them all (change allowed bond distance??)
>
> Can the tube cartoon recognize this? If I bond all the Ca together
> iteratively, the cartoon tube doesn't recognize that and go through
the
> bonds, is there another way?
>
> Cheers,
> JTM
>
> "We can be sure that if a detailed understanding of the molecular
basis of
> chemo-therapeutic activity were to be obtained, the advance of
medicine
> would be greatly accelerated."
>
> Linus Pauling, Nobel Laureate 1954
>
> "...everything that living things do can be understood in terms of the
> jigglings and wigglings of atoms."
>
> Richard Feynman
>
> *************************
> Jason Thomas Maynes
> PhD/MD Program
> Department of Biochemistry
> Faculty of Medicine
> University of Alberta
> ja...@biochem.ualberta.ca
> *************************
>
>
>
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