> I have one object showing the surface of a protein and another object showing > a ligand inside the protein. > Is it possible to use the clip command to define different clipping planes > for the 2 objects. > I want so "cut" the proteinsurface using clip, but the Ligand inside the > protein should not be clipped, but displayed completely.
I assume that PyMOL's clipping planes are simply OpenGL clipping planes, in which case the answer is "no". They're handled in hardware, not by the application. -Nat
