Cheom-gil,
(1) sorry, I don't think there's anyway to override the default color.
However, you could use a Python loop to automatically change the colors
of objects with certain names...for example
# save as colordist.py, then run from File menu
for a in cmd.get_names("objects"):
if a[0:5]=='wdist':
cmd.color("blue",a)
# end example
(2) to get the coordinates of the picked (pk1) atom...
# first pick an atom with Ctrl-middle-click, then issue
iterate_state 1,pk1,print (x,y,z)
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
-----Original Message-----
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of cheom-gil
cheong
Sent: Saturday, April 12, 2003 8:17 PM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] coloring distance line
Dear All :
When I set lb and rb and then issued distance command, the default color
of
the dotted line and the distance number is yellow. I change this color
everytime after I made distance object to make it easy to see. It is
kind of
tidious job. Can I change the default color of distance object?
I have another question. Can I know xyz coordinate of certain atom in
pymol
without opening pdb file with editing program?
Many thanks in advance..
Cheomgil Cheong, Ph.D.
Research Associate
Department of Molecular Biology
The Scripps Research Institute
cheomgilche...@hotmail.com
che...@scripps.edu
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