Camille,
Stereo ray-traced images aren't available yet, but you can prepare
them manually by tracing two images 5-6 degrees rotated about Y and then
combining them. Labels will have to be added manually for now.
For a CA trace:
set ribbon_trace,1
show ribbon
If you don't want a smooth trace, then
set ribbon_sampling,1
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
-----Original Message-----
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of
cami...@mrc-lmb.cam.ac.uk
Sent: Friday, April 04, 2003 7:05 AM
To: PyMOL-users@lists.sourceforge.net
Subject: [PyMOL] C alpha trace
Thanks to Ulrich for the quick reply to my last question,
another question for the BB, how do I show a ca trace? I took my
pdb
(all atoms) and did grep ca etc.. so I have a pdb containing
consecutively numbered ca atoms only. How do I tell pymol to draw
connections between them (n+1 and n-1)? I read that pymol has trouble
with connectivity outside normal chemical bond lengths.
Sorry, this sounds like it might have a very simple answer!
Thanks again,
Camille
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