HI, I am attempting to make a movie from a series of 50 pdb files. When I load the files individually they work fine, however when I load the files into a movie using a series of "load file.pdb,mov" commands only the first 2 frames are correct. In frames 3 and higher the connections between atoms are drawn apparently randomly so that the effect is that of a pile of "pixie sticks" rather than a molecule.
I get this effect on two different machines running redhat 7.3, one using pymol 0.78, and another using the "easy install" pymol 0.83 package for linux. I have though about adding CONNECT records to the pdb files to force proper bonding, or perhaps I can use babel to put them into some other format that will work. Thanks in Advance Russell Poyner