I am visualizing in PyMol electrostatic potential generated by PBEQ Solver from CHARMM-GUI at http://www.charmm-gui.org/?doc=input/pbeqsolver
The maps loads and colors nicely with the following commands suggested by the PBEQ Solver server: load 1zziA_pbeq.pdb load 1zziA_pbeq.dx, 1zziA_map show surface, 1zziA_pbeq ramp_new 1zziA_elvl, 1zziA_map,[-2,0,2] set surface_color, 1zziA_elvl, 1zziA_pbeq set surface_solvent, 1, 1zziA_pbeq Now I want to fit my structure to some reference one using super or align commands. As expected, the map no longer works, I cannot re-generate the original coloring after fitting. I suppose that I need to change the orientation of the map accordingly to the rotation of the structure. But... how to do that? Is it at all possible? Cheers, Janek ------------------------------------------------------------------------------ Register Now & Save for Velocity, the Web Performance & Operations Conference from O'Reilly Media. Velocity features a full day of expert-led, hands-on workshops and two days of sessions from industry leaders in dedicated Performance & Operations tracks. Use code vel09scf and Save an extra 15% before 5/3. http://p.sf.net/sfu/velocityconf _______________________________________________ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
