I did notice this on a Ubuntu 16.04 system that is using python3 -mvenv: total 32K drwxr-xr-x 6 root root 4.0K Mar 16 19:52 . drwx------ 7 root root 4.0K Mar 16 19:54 .. drwxr-xr-x 3 root root 4.0K Mar 16 19:54 bin drwxr-xr-x 2 root root 4.0K Mar 16 19:52 include drwxr-xr-x 3 root root 4.0K Mar 16 19:52 lib lrwxrwxrwx 1 root root 3 Mar 16 19:52 lib64 -> lib -rw-r--r-- 1 root root 60 Mar 16 19:52 pip-selfcheck.json -rw-r--r-- 1 root root 69 Mar 16 19:52 pyvenv.cfg drwxr-xr-x 3 root root 4.0K Mar 16 19:52 share
So it looks like lib64 should be symlinked to lib… Bert > On Mar 15, 2017, at 23:07, Bert JW Regeer <[email protected]> wrote: > > Could you try using: > > python3 -mvenv deprecation > > Please? > > I am wondering if this an issue with virtualenv using Py2 (32 bit) and Py3 > (64 bit)? I am grasping at straws here, but the whole lib64 thing is > interesting. > > While using the python in the venv, could you also run: > > import sys > print('\n'.join(sys.path)) > > I’d be interested in seeing what your sys.path is. > > What version of Linux are you running? CentOS 7? > > I am not sure why the version of zope.interface would change anything though. > > Thanks, > Bert JW Regeer > >> On Mar 15, 2017, at 21:03, Dan Clark <[email protected]> wrote: >> >> I think I figured it out. go to the bottom for the actual issue. Hint it's >> not a permission issue. If you're good you might be able to figure it out >> before the end. >> >> I decided to get as basic as possible. I SSH'ed into the EC2 VM and with in >> my home directory I used virtualenv to create a venv. >> >> (venv)[ec2-user@ip-172-31-13-110 ~]$ virtualenv -p python3 deprecation >> Running virtualenv with interpreter /opt/python/run/venv/bin/python3 >> Using real prefix '/usr' >> New python executable in deprecation/bin/python3 >> Also creating executable in deprecation/bin/python >> Installing setuptools, pip...done. >> >> >> Then I installed pyramid into that venv >> >> (deprecation)[ec2-user@ip-172-31-13-110 ~]$ pip install pyramid >> You are using pip version 6.0.8, however version 9.0.1 is available. >> You should consider upgrading via the 'pip install --upgrade pip' command. >> Collecting pyramid >> Downloading pyramid-1.8.3-py2.py3-none-any.whl (574kB) >> 100% |################################| 577kB 511kB/s >> Collecting PasteDeploy>=1.5.0 (from pyramid) >> Downloading PasteDeploy-1.5.2-py2.py3-none-any.whl >> Collecting zope.deprecation>=3.5.0 (from pyramid) >> Downloading zope.deprecation-4.2.0-py2.py3-none-any.whl >> Collecting repoze.lru>=0.4 (from pyramid) >> Downloading repoze.lru-0.6.tar.gz >> Collecting venusian>=1.0a3 (from pyramid) >> Downloading venusian-1.0.tar.gz (45kB) >> 100% |################################| 49kB 3.5MB/s >> Collecting WebOb>=1.7.0rc2 (from pyramid) >> Downloading WebOb-1.7.1-py2.py3-none-any.whl (83kB) >> 100% |################################| 86kB 2.6MB/s >> Collecting hupper (from pyramid) >> Downloading hupper-0.4.4-py2.py3-none-any.whl >> Requirement already satisfied (use --upgrade to upgrade): setuptools in >> ./deprecation/lib/python3.4/site-packages (from pyramid) >> Collecting translationstring>=0.4 (from pyramid) >> Downloading translationstring-1.3-py2.py3-none-any.whl >> Collecting zope.interface>=3.8.0 (from pyramid) >> Downloading zope.interface-4.3.3.tar.gz (150kB) >> 100% |################################| 151kB 1.7MB/s >> Installing collected packages: zope.interface, translationstring, hupper, >> WebOb, venusian, repoze.lru, zope.deprecation, PasteDeploy, pyramid >> Running setup.py install for zope.interface >> building 'zope.interface._zope_interface_coptimizations' extension >> gcc -pthread -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG >> -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector >> --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv >> -fPIC -I/usr/include/python3.4m -c >> src/zope/interface/_zope_interface_coptimizations.c -o >> build/temp.linux-x86_64-3.4/src/zope/interface/_zope_interface_coptimizations.o >> src/zope/interface/_zope_interface_coptimizations.c:34:1: warning: >> "METH_KEYWORDS" redefined >> In file included from /usr/include/python3.4m/Python.h:90, >> from >> src/zope/interface/_zope_interface_coptimizations.c:15: >> /usr/include/python3.4m/methodobject.h:56:1: warning: this is the >> location of the previous definition >> gcc -pthread -shared >> build/temp.linux-x86_64-3.4/src/zope/interface/_zope_interface_coptimizations.o >> -L/usr/lib64 -lpython3.4m -o >> build/lib.linux-x86_64-3.4/zope/interface/_zope_interface_coptimizations.cpython-34m.so >> Skipping installation of >> /home/ec2-user/deprecation/lib64/python3.4/site-packages/zope/__init__.py >> (namespace package) >> Installing >> /home/ec2-user/deprecation/lib64/python3.4/site-packages/zope.interface-4.3.3-py3.4-nspkg.pth >> >> >> >> Running setup.py install for venusian >> Running setup.py install for repoze.lru >> Skipping installation of >> /home/ec2-user/deprecation/lib/python3.4/site-packages/repoze/__init__.py >> (namespace package) >> Installing >> /home/ec2-user/deprecation/lib/python3.4/site-packages/repoze.lru-0.6-py3.4-nspkg.pth >> >> >> >> Successfully installed PasteDeploy-1.5.2 WebOb-1.7.1 hupper-0.4.4 >> pyramid-1.8.3 repoze.lru-0.6 translationstring-1.3 venusian-1.0 >> zope.deprecation-4.2.0 zope.interface-4.3.3 >> >> And then checked for zope.deprecation >> >> (deprecation)[ec2-user@ip-172-31-13-110 ~]$ pip freeze >> You are using pip version 6.0.8, however version 9.0.1 is available. >> You should consider upgrading via the 'pip install --upgrade pip' command. >> hupper==0.4.4 >> PasteDeploy==1.5.2 >> pyramid==1.8.3 >> repoze.lru==0.6 >> translationstring==1.3 >> venusian==1.0 >> WebOb==1.7.1 >> zope.deprecation==4.2.0 >> zope.interface==4.3.3 >> >> Then I jumped into python and imported pip and made sure I still could see >> it. >> >> (deprecation)[ec2-user@ip-172-31-13-110 deprecation]$ python >> Python 3.4.3 (default, Sep 1 2016, 23:33:38) >> [GCC 4.8.3 20140911 (Red Hat 4.8.3-9)] on linux >> Type "help", "copyright", "credits" or "license" for more information. >>>>> import pip #needed to use the pip functions >>>>> for i in pip.get_installed_distributions(local_only=True): >> ... print(i) >> ... >> zope.interface 4.3.3 >> pip 6.0.8 >> pyramid 1.8.3 >> zope.deprecation 4.2.0 >> translationstring 1.3 >> venusian 1.0 >> PasteDeploy 1.5.2 >> repoze.lru 0.6 >> setuptools 12.0.5 >> WebOb 1.7.1 >> hupper 0.4.4 >>>>> >> >> Then I tried to import zope.deprecation, but ng >> >>>>> from zope.deprecation import deprecated >> Traceback (most recent call last): >> File "<stdin>", line 1, in <module> >> ImportError: No module named 'zope.deprecation' >> >> From here it didn't make sense. I went into site-packages and >> zope.deprecation was there, BUT zope.interfaces was missing, but it was >> still working? Pip happily reported that zope.interface was still there >> >> Then as I was uninstalling/installing with various options I noticed the >> paths. zope.deprecation was in lib and zope.interface was in lib64 >> >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ pwd >> /home/ec2-user/deprecation/lib/python3.4/site-packages >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ ls -l >> total 412 >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 appdirs-1.4.3.dist-info >> -rw-rw-r-- 1 ec2-user ec2-user 24701 Mar 16 02:34 appdirs.py >> -rw-rw-r-- 1 ec2-user ec2-user 126 Mar 16 02:34 easy_install.py >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:13 hupper >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 hupper-0.4.4.dist-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:34 packaging >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 packaging-16.8.dist-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:13 paste >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 >> PasteDeploy-1.5.2.dist-info >> -rw-rw-r-- 1 ec2-user ec2-user 304 Mar 16 02:13 >> PasteDeploy-1.5.2-py2.6-nspkg.pth >> drwxrwxr-x 11 ec2-user ec2-user 4096 Mar 16 02:33 pip >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:33 pip-9.0.1.dist-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:34 pkg_resources >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 __pycache__ >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 pyparsing-2.2.0.dist-info >> -rw-rw-r-- 1 ec2-user ec2-user 231039 Mar 16 02:34 pyparsing.py >> drwxrwxr-x 7 ec2-user ec2-user 4096 Mar 16 02:13 pyramid >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 pyramid-1.8.3.dist-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:13 repoze >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 >> repoze.lru-0.6-py3.4.egg-info >> -rw-rw-r-- 1 ec2-user ec2-user 305 Mar 16 02:13 >> repoze.lru-0.6-py3.4-nspkg.pth >> drwxrwxr-x 4 ec2-user ec2-user 4096 Mar 16 02:34 setuptools >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 >> setuptools-34.3.2.dist-info >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:34 six-1.10.0.dist-info >> -rw-rw-r-- 1 ec2-user ec2-user 30098 Mar 16 02:34 six.py >> drwxrwxr-x 4 ec2-user ec2-user 4096 Mar 16 02:13 translationstring >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 >> translationstring-1.3.dist-info >> drwxrwxr-x 5 ec2-user ec2-user 4096 Mar 16 02:13 venusian >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 >> venusian-1.0-py3.4.egg-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:13 webob >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:13 WebOb-1.7.1.dist-info >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:42 zope >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:42 >> zope.deprecation-4.2.0.dist-info >> -rw-rw-r-- 1 ec2-user ec2-user 349 Mar 16 02:42 >> zope.deprecation-4.2.0-py2.7-nspkg.pth >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ cd zope >> (deprecation)[ec2-user@ip-172-31-13-110 zope]$ ls -l >> total 4 >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:42 deprecation >> (deprecation)[ec2-user@ip-172-31-13-110 zope]$ >> >> And zope.interface... >> >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ pwd >> /home/ec2-user/deprecation/lib64/python3.4/site-packages >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ ls -l >> total 12 >> drwxrwxr-x 3 ec2-user ec2-user 4096 Mar 16 02:42 zope >> drwxrwxr-x 2 ec2-user ec2-user 4096 Mar 16 02:42 >> zope.interface-4.3.3-py3.4.egg-info >> -rw-rw-r-- 1 ec2-user ec2-user 529 Mar 16 02:42 >> zope.interface-4.3.3-py3.4-nspkg.pth >> (deprecation)[ec2-user@ip-172-31-13-110 site-packages]$ cd zope >> (deprecation)[ec2-user@ip-172-31-13-110 zope]$ ls -l >> total 4 >> drwxrwxr-x 5 ec2-user ec2-user 4096 Mar 16 02:42 interface >> (deprecation)[ec2-user@ip-172-31-13-110 zope]$ >> >> My thought was that perhaps the interpreter was getting confused because it >> found zope under lib64 but not deprecate and just gave up.To test this out I >> tried uninstalling zope.interface, and I was now able to import >> zope.deprecate! >> >> SO NOW WHAT?? >> >> Anyway, I am going to sleep. I doubt I'll work on this tomorrow morning, but >> if anyone can tell me how to trick the pip into installing zope.interface >> into lib/site-packages instead of lib64/site-packages, I'd appreciate it. >> >> Thanks, >> --Dan >> >> >> On Wed, Mar 15, 2017 at 9:38 PM, Dan Clark <[email protected]> wrote: >> Here's the traceback >> >> [Thu Mar 16 01:36:38.429962 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] mod_wsgi (pid=2187): Target WSGI script >> '/opt/python/current/app/application.py' cannot be loaded as Python module. >> [Thu Mar 16 01:36:38.430078 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] mod_wsgi (pid=2187): Exception occurred processing WSGI >> script '/opt/python/current/app/application.py'. >> [Thu Mar 16 01:36:38.430145 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] Traceback (most recent call last): >> [Thu Mar 16 01:36:38.430237 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] File "/opt/python/current/app/application.py", line >> 2, in <module> >> [Thu Mar 16 01:36:38.430255 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] from pyramid.config import Configurator >> [Thu Mar 16 01:36:38.430314 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] File >> "/opt/python/run/venv/lib/python3.4/site-packages/pyramid/config/__init__.py", >> line 12, in <module> >> [Thu Mar 16 01:36:38.430329 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] from pyramid.interfaces import ( >> [Thu Mar 16 01:36:38.430383 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] File >> "/opt/python/run/venv/lib/python3.4/site-packages/pyramid/interfaces.py", >> line 1, in <module> >> [Thu Mar 16 01:36:38.430399 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] from zope.deprecation import deprecated >> [Thu Mar 16 01:36:38.430444 2017] [:error] [pid 2187] [remote >> 69.127.251.49:50376] ImportError: No module named 'zope.deprecation' >> [Thu Mar 16 01:36:38.569219 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] mod_wsgi (pid=2187): Target WSGI script >> '/opt/python/current/app/application.py' cannot be loaded as Python module. >> [Thu Mar 16 01:36:38.569285 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] mod_wsgi (pid=2187): Exception occurred processing WSGI >> script '/opt/python/current/app/application.py'. >> [Thu Mar 16 01:36:38.569339 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] Traceback (most recent call last): >> [Thu Mar 16 01:36:38.569418 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] File "/opt/python/current/app/application.py", line >> 2, in <module> >> [Thu Mar 16 01:36:38.569435 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] from pyramid.config import Configurator >> [Thu Mar 16 01:36:38.569493 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] File >> "/opt/python/run/venv/lib/python3.4/site-packages/pyramid/config/__init__.py", >> line 12, in <module> >> [Thu Mar 16 01:36:38.569509 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] from pyramid.interfaces import ( >> [Thu Mar 16 01:36:38.569563 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] File >> "/opt/python/run/venv/lib/python3.4/site-packages/pyramid/interfaces.py", >> line 1, in <module> >> [Thu Mar 16 01:36:38.569595 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] from zope.deprecation import deprecated >> [Thu Mar 16 01:36:38.569638 2017] [:error] [pid 2187] [remote >> 69.127.251.49:54728] ImportError: No module named 'zope.deprecation' >> >> On Wed, Mar 15, 2017 at 3:17 PM, Tres Seaver <[email protected]> wrote: >> -----BEGIN PGP SIGNED MESSAGE----- >> Hash: SHA1 >> >> On 03/15/2017 07:23 AM, Dan Clark wrote: >>> Tres, >>> >>> I just committed the hello pyramid project to >>> https://github.com/adidas/aws_hello_pyramid. It's a simple script >>> (with requirements.txt) that can be tweaked to recreate the issue on >>> AWS. Just need to change the requirements.txt to use 4.2. >>> >>> Anyway, I ran out of time today, but if you give me another morning I >>> can upload the project with 4.2 and get the complete traceback. >> >> Dan, >> >> Thanks for working on it, and for documenting your path. If you figure >> something out about why you are needing to pin zope.deprecation, please >> create an issue for either pyramid[1] or zope.deprecation[2] and mentaion >> me (@tseaver) in the description. >> >> [1] https://github.com/Pylons/pyramid/issues/ >> [2] https://github.com/zopefoundation/zope.deprecation/issues >> >> >> Tres. >> - -- >> =================================================================== >> Tres Seaver +1 540-429-0999 [email protected] >> Palladion Software "Excellence by Design" http://palladion.com >> -----BEGIN PGP SIGNATURE----- >> Version: GnuPG v1 >> >> iQIcBAEBAgAGBQJYyZNYAAoJEPKpaDSJE9HYwwsQALUqMf+LmYVHq6m8+A1nBCTT >> M9ZPkb6eXYd+LaBTeCt0ah6/vtpbdsYeiDW/xKHWaJUZKq7v0CUvDd+MBaH9wmyc >> vIKDwMm7NLdPHmke2W+RhseqRzRZlEi8fb12LXHH2wNJSWOiCXQqjSVH3I2ZszNI >> oZI+nshAV/Yieu6zS3TvcjinW7uKZKc6D68UKYwgA8KAW2UK62t3TGdnojpEnNXX >> nJI9ytUCFJLX1qGMM5DLF1uzKXqpjVUSyuw3MJcL6fncAlLNRndML51uLkYj2aiT >> iI4g4HdptW46peqdPJJRh4tjL+6/87ZMgwsvoeRjmwSVEWV2VuYU4KuThxuRR96D >> lmxsJf8HgdoU1ojVgZkLeaufpgHbLqcdqwwKFvQDHPM66UZ7s1oPSAS6nc8RvZLi >> WSMb5g5LRty2QIctCywgiez9CeO6BKeaQdPGDtearXXYnzawyMwxKJDaMCGDdKpa >> 1nYE6Rz/MRz8Pox1uTzUsTN3UooZ+7K6c7tybBH8Jy7TuhI1whraIribkKvdWTWl >> DZ/YDzoAFuLDe1oy1Ekm4hT93AFWACizE2OXDiJD3tGUi67V0IABniM/s27pb0uC >> asQDEAeW21Eln7AD+fn3+/cA8ppsCRXPkfzMALItATjBeyKxXvA848yq32XCweny >> Ntghx0YOXesn4ix5Oa0u >> =soKF >> -----END PGP SIGNATURE----- >> >> -- >> You received this message because you are subscribed to a topic in the >> Google Groups "pylons-discuss" group. >> To unsubscribe from this topic, visit >> https://groups.google.com/d/topic/pylons-discuss/MSAMBzwx7aQ/unsubscribe. >> To unsubscribe from this group and all its topics, send an email to >> [email protected]. >> To post to this group, send email to [email protected]. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/pylons-discuss/oac412%24p8k%241%40blaine.gmane.org. >> For more options, visit https://groups.google.com/d/optout. >> >> >> >> -- >> You received this message because you are subscribed to the Google Groups >> "pylons-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected]. >> To post to this group, send email to [email protected]. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/pylons-discuss/CAKbG-MjGQe327AQGoPqYXR76f5uDJ7dMmG0Zu2%3D_TztuTJcwAw%40mail.gmail.com. >> For more options, visit https://groups.google.com/d/optout. > > -- > You received this message because you are subscribed to the Google Groups > "pylons-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/pylons-discuss/FCC078CD-075A-4729-B69B-E5928B1A22D1%400x58.com. > For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "pylons-discuss" group. 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