Did you do a ps -ef | grep yum? It tells you the pid. I wouldn't kill it. Let
it finish its other work.
If the pid isn't present, remove the pid-file and retry. If that fails, you
have some serious
troubleshooting to do tracing the process, googling the web for the error
message, and other
drill-down.
On Sep 3, 2013, at 11:41 AM, Glenn Poston <gposton1...@gmail.com> wrote:
> Any ideas???
>
> On Friday, June 28, 2013 9:38:29 AM UTC-4, Glenn Poston wrote:
> Running Amazon Linux (which is essentially Centos5.5).
>
> Anyone seen random yum errors like this one? I don't think it's necessarily
> related to Puppet, but it randomly fails my puppet runs and I don't know how
> to fix it.
>
> Jun 28 08:41:34 ip-10-159-65-145 run_puppet: [Notice:
> /Stage[main]/Zookeeper/Package[zookeeper]/ensure: created
> Jun 28 08:41:34 ip-10-159-65-145 run_puppet: [Notice:
> /Stage[main]/Zookeeper/File[/var/lib/zookeeper/data]/ensure: created
> Jun 28 08:41:34 ip-10-159-65-145 run_puppet: [Notice:
> /Stage[main]/Zookeeper/File[/var/lib/zookeeper/data/myid]/ensure: created
> Jun 28 08:41:34 ip-10-159-65-145 run_puppet: [Notice:
> /Stage[main]/Yum_repo::Configs/File[/etc/yum.repos.d/inin-epel.repo]/ensure:
> defined content as '{md5}b94171f63e31f07b8bd75444073e301c'
> Jun 28 08:41:35 ip-10-159-65-145 run_puppet: [Notice:
> /Stage[main]/Zookeeper/File[/etc/zookeeper/zookeeper-env.sh]/content: content
> changed '{md5}cd666c7520ce5279ddbc185512b0b177' to
> '{md5}5cb59b25f5e7567d94ba14b06f6e7081'
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: [Error: Execution of
> '/usr/bin/yum -d 0 -e 0 -y install daemonize' returned 1: Existing lock
> /var/run/yum.pid: another copy is running as pid 2502.
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Another app is currently holding
> the yum lock; waiting for it to exit...
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: The other application is: yum
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Memory : 40 M RSS (235 MB
> VSZ)
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Started: Fri Jun 28 08:41:33
> 2013 - 00:03 ago
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: State : Running, pid: 2502
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Error: database disk image is
> malformed
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: [Error:
> /Stage[main]/Mcollective/Package[daemonize]/ensure: change from absent to
> present failed: Execution of '/usr/bin/yum -d 0 -e 0 -y install daemonize'
> returned 1: Existing lock /var/run/yum.pid: another copy is running as pid
> 2502.
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Another app is currently holding
> the yum lock; waiting for it to exit...
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: The other application is: yum
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Memory : 40 M RSS (235 MB
> VSZ)
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Started: Fri Jun 28 08:41:33
> 2013 - 00:03 ago
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: State : Running, pid: 2502
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: Error: database disk image is
> malformed
> Jun 28 08:41:38 ip-10-159-65-145 run_puppet: [mNotice:
> /Stage[main]/Zookeeper/File[/etc/zookeeper/zoo.cfg]/content: content changed
> '{md5}5c543298c5572c3caf40a3d108309019' to
> '{md5}31db609f6601a8a02561d411e98db12b'
> Jun 28 08:41:39 ip-10-159-65-145 run_puppet: [mNotice:
> /Stage[main]/Puppet/File[/usr/local/bin/run_puppet.sh]/content: content
> changed '{md5}4e9496313a0b4152c663defce5100af5' to
> '{md5}49d78e473fa2202dea13e9b195e63575'
> Jun 28 08:41:39 ip-10-159-65-145 run_puppet: [mNotice:
> /Stage[main]/Yum_repo::Configs/Exec[puppet_repo]/returns: executed
> successfully
> Jun 28 08:41:48 ip-10-159-65-145 run_puppet: [mNotice:
> /Stage[main]/Mcollective::Common/Package[mcollective-package-agent]/ensure:
> created
>
> The problem does not persist. Yum packages are installed by puppet before
> and after the errors. A subsequent puppet run installs the previously
> skipped packages fine.
>
> It's as if some background process creates a lock, while updating the yum DB,
> but when the lock is released, the yum DB is still in a bad state
> (momentarily).
>
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