Dear useRs,
update math/R 3.3.3 -> 3.4.0
(Changes listed at https://cran.r-project.org/doc/manuals/r-release/NEWS.html)
OK?
Best regards,
Ingo
Index: Makefile
===================================================================
RCS file: /cvs/ports/math/R/Makefile,v
retrieving revision 1.91
diff -u -p -r1.91 Makefile
--- Makefile 9 Mar 2017 10:10:41 -0000 1.91
+++ Makefile 22 Apr 2017 17:38:55 -0000
@@ -1,9 +1,9 @@
# $OpenBSD: Makefile,v 1.91 2017/03/09 10:10:41 feinerer Exp $
COMMENT= powerful math/statistics/graphics language
-DISTNAME= R-3.3.3
+DISTNAME= R-3.4.0
-SO_VERSION= 32.0
+SO_VERSION= 33.0
.for _lib in R Rblas Rlapack
SHARED_LIBS += ${_lib} ${SO_VERSION}
.endfor
Index: distinfo
===================================================================
RCS file: /cvs/ports/math/R/distinfo,v
retrieving revision 1.33
diff -u -p -r1.33 distinfo
--- distinfo 9 Mar 2017 05:18:44 -0000 1.33
+++ distinfo 22 Apr 2017 17:38:55 -0000
@@ -1,2 +1,2 @@
-SHA256 (R-3.3.3.tar.gz) = WrdoBTonUIRhj7ZptPuq3MORWJmKh+hGUyOClZC8/Gw=
-SIZE (R-3.3.3.tar.gz) = 29804326
+SHA256 (R-3.4.0.tar.gz) = KI6e1CRXxHcgeAQzs9XDwgmDBIt4kpHManuqEflCi5E=
+SIZE (R-3.4.0.tar.gz) = 30175855
Index: patches/patch-configure
===================================================================
RCS file: /cvs/ports/math/R/patches/patch-configure,v
retrieving revision 1.30
diff -u -p -r1.30 patch-configure
--- patches/patch-configure 9 Mar 2017 05:18:44 -0000 1.30
+++ patches/patch-configure 22 Apr 2017 17:38:55 -0000
@@ -1,8 +1,8 @@
$OpenBSD: patch-configure,v 1.30 2017/03/09 05:18:44 feinerer Exp $
---- configure.orig Tue Mar 7 13:02:27 2017
-+++ configure Tue Mar 7 13:03:01 2017
-@@ -35492,8 +35492,8 @@ fi
+--- configure.orig Wed Apr 19 22:38:22 2017
++++ configure Sat Apr 22 18:00:09 2017
+@@ -40238,8 +40238,8 @@ fi
fi
if test "${have_zlib}" = yes; then
@@ -13,7 +13,7 @@ $OpenBSD: patch-configure,v 1.30 2017/03
if ${r_cv_header_zlib_h+:} false; then :
$as_echo_n "(cached) " >&6
else
-@@ -35508,7 +35508,7 @@ else
+@@ -40254,7 +40254,7 @@ else
#include <zlib.h>
int main() {
#ifdef ZLIB_VERNUM
Index: pkg/PLIST
===================================================================
RCS file: /cvs/ports/math/R/pkg/PLIST,v
retrieving revision 1.33
diff -u -p -r1.33 PLIST
--- pkg/PLIST 9 Mar 2017 05:18:44 -0000 1.33
+++ pkg/PLIST 22 Apr 2017 17:38:55 -0000
@@ -94,6 +94,7 @@ lib/R/library/KernSmooth/DESCRIPTION
lib/R/library/KernSmooth/INDEX
lib/R/library/KernSmooth/Meta/
lib/R/library/KernSmooth/Meta/Rd.rds
+lib/R/library/KernSmooth/Meta/features.rds
lib/R/library/KernSmooth/Meta/hsearch.rds
lib/R/library/KernSmooth/Meta/links.rds
lib/R/library/KernSmooth/Meta/nsInfo.rds
@@ -137,6 +138,7 @@ lib/R/library/MASS/INDEX
lib/R/library/MASS/Meta/
lib/R/library/MASS/Meta/Rd.rds
lib/R/library/MASS/Meta/data.rds
+lib/R/library/MASS/Meta/features.rds
lib/R/library/MASS/Meta/hsearch.rds
lib/R/library/MASS/Meta/links.rds
lib/R/library/MASS/Meta/nsInfo.rds
@@ -204,6 +206,7 @@ lib/R/library/Matrix/LICENCE
lib/R/library/Matrix/Meta/
lib/R/library/Matrix/Meta/Rd.rds
lib/R/library/Matrix/Meta/data.rds
+lib/R/library/Matrix/Meta/features.rds
lib/R/library/Matrix/Meta/hsearch.rds
lib/R/library/Matrix/Meta/links.rds
lib/R/library/Matrix/Meta/nsInfo.rds
@@ -301,6 +304,7 @@ lib/R/library/base/INDEX
lib/R/library/base/Meta/
lib/R/library/base/Meta/Rd.rds
lib/R/library/base/Meta/demo.rds
+lib/R/library/base/Meta/features.rds
lib/R/library/base/Meta/hsearch.rds
lib/R/library/base/Meta/links.rds
lib/R/library/base/Meta/package.rds
@@ -330,6 +334,7 @@ lib/R/library/boot/INDEX
lib/R/library/boot/Meta/
lib/R/library/boot/Meta/Rd.rds
lib/R/library/boot/Meta/data.rds
+lib/R/library/boot/Meta/features.rds
lib/R/library/boot/Meta/hsearch.rds
lib/R/library/boot/Meta/links.rds
lib/R/library/boot/Meta/nsInfo.rds
@@ -378,6 +383,7 @@ lib/R/library/class/DESCRIPTION
lib/R/library/class/INDEX
lib/R/library/class/Meta/
lib/R/library/class/Meta/Rd.rds
+lib/R/library/class/Meta/features.rds
lib/R/library/class/Meta/hsearch.rds
lib/R/library/class/Meta/links.rds
lib/R/library/class/Meta/nsInfo.rds
@@ -422,6 +428,7 @@ lib/R/library/cluster/INDEX
lib/R/library/cluster/Meta/
lib/R/library/cluster/Meta/Rd.rds
lib/R/library/cluster/Meta/data.rds
+lib/R/library/cluster/Meta/features.rds
lib/R/library/cluster/Meta/hsearch.rds
lib/R/library/cluster/Meta/links.rds
lib/R/library/cluster/Meta/nsInfo.rds
@@ -471,6 +478,7 @@ lib/R/library/codetools/DESCRIPTION
lib/R/library/codetools/INDEX
lib/R/library/codetools/Meta/
lib/R/library/codetools/Meta/Rd.rds
+lib/R/library/codetools/Meta/features.rds
lib/R/library/codetools/Meta/hsearch.rds
lib/R/library/codetools/Meta/links.rds
lib/R/library/codetools/Meta/nsInfo.rds
@@ -494,6 +502,7 @@ lib/R/library/compiler/DESCRIPTION
lib/R/library/compiler/INDEX
lib/R/library/compiler/Meta/
lib/R/library/compiler/Meta/Rd.rds
+lib/R/library/compiler/Meta/features.rds
lib/R/library/compiler/Meta/hsearch.rds
lib/R/library/compiler/Meta/links.rds
lib/R/library/compiler/Meta/nsInfo.rds
@@ -518,6 +527,7 @@ lib/R/library/datasets/INDEX
lib/R/library/datasets/Meta/
lib/R/library/datasets/Meta/Rd.rds
lib/R/library/datasets/Meta/data.rds
+lib/R/library/datasets/Meta/features.rds
lib/R/library/datasets/Meta/hsearch.rds
lib/R/library/datasets/Meta/links.rds
lib/R/library/datasets/Meta/nsInfo.rds
@@ -543,6 +553,7 @@ lib/R/library/foreign/DESCRIPTION
lib/R/library/foreign/INDEX
lib/R/library/foreign/Meta/
lib/R/library/foreign/Meta/Rd.rds
+lib/R/library/foreign/Meta/features.rds
lib/R/library/foreign/Meta/hsearch.rds
lib/R/library/foreign/Meta/links.rds
lib/R/library/foreign/Meta/nsInfo.rds
@@ -590,6 +601,7 @@ lib/R/library/grDevices/INDEX
lib/R/library/grDevices/Meta/
lib/R/library/grDevices/Meta/Rd.rds
lib/R/library/grDevices/Meta/demo.rds
+lib/R/library/grDevices/Meta/features.rds
lib/R/library/grDevices/Meta/hsearch.rds
lib/R/library/grDevices/Meta/links.rds
lib/R/library/grDevices/Meta/nsInfo.rds
@@ -736,6 +748,7 @@ lib/R/library/graphics/INDEX
lib/R/library/graphics/Meta/
lib/R/library/graphics/Meta/Rd.rds
lib/R/library/graphics/Meta/demo.rds
+lib/R/library/graphics/Meta/features.rds
lib/R/library/graphics/Meta/hsearch.rds
lib/R/library/graphics/Meta/links.rds
lib/R/library/graphics/Meta/nsInfo.rds
@@ -776,6 +789,7 @@ lib/R/library/grid/DESCRIPTION
lib/R/library/grid/INDEX
lib/R/library/grid/Meta/
lib/R/library/grid/Meta/Rd.rds
+lib/R/library/grid/Meta/features.rds
lib/R/library/grid/Meta/hsearch.rds
lib/R/library/grid/Meta/links.rds
lib/R/library/grid/Meta/nsInfo.rds
@@ -848,6 +862,7 @@ lib/R/library/lattice/Meta/
lib/R/library/lattice/Meta/Rd.rds
lib/R/library/lattice/Meta/data.rds
lib/R/library/lattice/Meta/demo.rds
+lib/R/library/lattice/Meta/features.rds
lib/R/library/lattice/Meta/hsearch.rds
lib/R/library/lattice/Meta/links.rds
lib/R/library/lattice/Meta/nsInfo.rds
@@ -899,6 +914,7 @@ lib/R/library/methods/DESCRIPTION
lib/R/library/methods/INDEX
lib/R/library/methods/Meta/
lib/R/library/methods/Meta/Rd.rds
+lib/R/library/methods/Meta/features.rds
lib/R/library/methods/Meta/hsearch.rds
lib/R/library/methods/Meta/links.rds
lib/R/library/methods/Meta/nsInfo.rds
@@ -926,6 +942,7 @@ lib/R/library/mgcv/INDEX
lib/R/library/mgcv/Meta/
lib/R/library/mgcv/Meta/Rd.rds
lib/R/library/mgcv/Meta/data.rds
+lib/R/library/mgcv/Meta/features.rds
lib/R/library/mgcv/Meta/hsearch.rds
lib/R/library/mgcv/Meta/links.rds
lib/R/library/mgcv/Meta/nsInfo.rds
@@ -978,6 +995,7 @@ lib/R/library/nlme/LICENCE
lib/R/library/nlme/Meta/
lib/R/library/nlme/Meta/Rd.rds
lib/R/library/nlme/Meta/data.rds
+lib/R/library/nlme/Meta/features.rds
lib/R/library/nlme/Meta/hsearch.rds
lib/R/library/nlme/Meta/links.rds
lib/R/library/nlme/Meta/nsInfo.rds
@@ -1043,6 +1061,7 @@ lib/R/library/nnet/DESCRIPTION
lib/R/library/nnet/INDEX
lib/R/library/nnet/Meta/
lib/R/library/nnet/Meta/Rd.rds
+lib/R/library/nnet/Meta/features.rds
lib/R/library/nnet/Meta/hsearch.rds
lib/R/library/nnet/Meta/links.rds
lib/R/library/nnet/Meta/nsInfo.rds
@@ -1085,6 +1104,7 @@ lib/R/library/parallel/DESCRIPTION
lib/R/library/parallel/INDEX
lib/R/library/parallel/Meta/
lib/R/library/parallel/Meta/Rd.rds
+lib/R/library/parallel/Meta/features.rds
lib/R/library/parallel/Meta/hsearch.rds
lib/R/library/parallel/Meta/links.rds
lib/R/library/parallel/Meta/nsInfo.rds
@@ -1117,6 +1137,7 @@ lib/R/library/rpart/INDEX
lib/R/library/rpart/Meta/
lib/R/library/rpart/Meta/Rd.rds
lib/R/library/rpart/Meta/data.rds
+lib/R/library/rpart/Meta/features.rds
lib/R/library/rpart/Meta/hsearch.rds
lib/R/library/rpart/Meta/links.rds
lib/R/library/rpart/Meta/nsInfo.rds
@@ -1182,6 +1203,7 @@ lib/R/library/spatial/DESCRIPTION
lib/R/library/spatial/INDEX
lib/R/library/spatial/Meta/
lib/R/library/spatial/Meta/Rd.rds
+lib/R/library/spatial/Meta/features.rds
lib/R/library/spatial/Meta/hsearch.rds
lib/R/library/spatial/Meta/links.rds
lib/R/library/spatial/Meta/nsInfo.rds
@@ -1250,6 +1272,7 @@ lib/R/library/splines/DESCRIPTION
lib/R/library/splines/INDEX
lib/R/library/splines/Meta/
lib/R/library/splines/Meta/Rd.rds
+lib/R/library/splines/Meta/features.rds
lib/R/library/splines/Meta/hsearch.rds
lib/R/library/splines/Meta/links.rds
lib/R/library/splines/Meta/nsInfo.rds
@@ -1277,6 +1300,7 @@ lib/R/library/stats/INDEX
lib/R/library/stats/Meta/
lib/R/library/stats/Meta/Rd.rds
lib/R/library/stats/Meta/demo.rds
+lib/R/library/stats/Meta/features.rds
lib/R/library/stats/Meta/hsearch.rds
lib/R/library/stats/Meta/links.rds
lib/R/library/stats/Meta/nsInfo.rds
@@ -1308,6 +1332,7 @@ lib/R/library/stats4/DESCRIPTION
lib/R/library/stats4/INDEX
lib/R/library/stats4/Meta/
lib/R/library/stats4/Meta/Rd.rds
+lib/R/library/stats4/Meta/features.rds
lib/R/library/stats4/Meta/hsearch.rds
lib/R/library/stats4/Meta/links.rds
lib/R/library/stats4/Meta/nsInfo.rds
@@ -1334,6 +1359,7 @@ lib/R/library/survival/INDEX
lib/R/library/survival/Meta/
lib/R/library/survival/Meta/Rd.rds
lib/R/library/survival/Meta/data.rds
+lib/R/library/survival/Meta/features.rds
lib/R/library/survival/Meta/hsearch.rds
lib/R/library/survival/Meta/links.rds
lib/R/library/survival/Meta/nsInfo.rds
@@ -1367,6 +1393,9 @@ lib/R/library/survival/doc/splines.pdf
lib/R/library/survival/doc/tests.R
lib/R/library/survival/doc/tests.Rnw
lib/R/library/survival/doc/tests.pdf
+lib/R/library/survival/doc/tiedtimes.R
+lib/R/library/survival/doc/tiedtimes.Rnw
+lib/R/library/survival/doc/tiedtimes.pdf
lib/R/library/survival/doc/timedep.R
lib/R/library/survival/doc/timedep.Rnw
lib/R/library/survival/doc/timedep.pdf
@@ -1390,6 +1419,7 @@ lib/R/library/tcltk/INDEX
lib/R/library/tcltk/Meta/
lib/R/library/tcltk/Meta/Rd.rds
lib/R/library/tcltk/Meta/demo.rds
+lib/R/library/tcltk/Meta/features.rds
lib/R/library/tcltk/Meta/hsearch.rds
lib/R/library/tcltk/Meta/links.rds
lib/R/library/tcltk/Meta/nsInfo.rds
@@ -1433,6 +1463,7 @@ lib/R/library/tools/DESCRIPTION
lib/R/library/tools/INDEX
lib/R/library/tools/Meta/
lib/R/library/tools/Meta/Rd.rds
+lib/R/library/tools/Meta/features.rds
lib/R/library/tools/Meta/hsearch.rds
lib/R/library/tools/Meta/links.rds
lib/R/library/tools/Meta/nsInfo.rds
@@ -1777,6 +1808,7 @@ lib/R/library/utils/DESCRIPTION
lib/R/library/utils/INDEX
lib/R/library/utils/Meta/
lib/R/library/utils/Meta/Rd.rds
+lib/R/library/utils/Meta/features.rds
lib/R/library/utils/Meta/hsearch.rds
lib/R/library/utils/Meta/links.rds
lib/R/library/utils/Meta/nsInfo.rds
Index: pkg/README
===================================================================
RCS file: /cvs/ports/math/R/pkg/README,v
retrieving revision 1.6
diff -u -p -r1.6 README
--- pkg/README 9 Mar 2017 05:18:44 -0000 1.6
+++ pkg/README 22 Apr 2017 17:38:55 -0000
@@ -24,8 +24,8 @@ can be customized via ~/.R/Makevars
(https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Customizing-package-compilation).
E.g., for using recent compilers (packages g++ and gcc) add
-CC='egcc -std=gnu99'
+CC=egcc -std=gnu99
CXX=eg++
-CXX1X=eg++
-CXX1XSTD='-std=c++11'
-CXX1XPICFLAGS=-fpic
+CXX11=eg++
+CXX11STD=-std=c++11
+CXX11PICFLAGS=-fpic
