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sebastic pushed a change to branch master
in repository netcdf.
from e9b1dec Don't use libjs-jquery for Doxygen docs.
new 2cfdf3d New upstream version 4.6.1
new 6184d1c Merge tag 'upstream/4.6.1'
new ebbb8ec New upstream release.
new fcf6fe0 Add lintian override for
vcs-deprecated-in-debian-infrastructure.
new 2578586 Drop big-endian.patch, applied upstream. Refresh
remaining patches.
new cda75dc Update symbols for 4.6.1.
new cebb54c Set distribution to unstable.
The 7 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.github/CODEOWNERS | 9 +
.gitignore | 1 -
CMakeLists.txt | 246 +--
CODE_OF_CONDUCT.md | 46 +
Makefile.am | 42 +-
Makefile.in | 59 +-
RELEASE_NOTES.md | 8 +-
aclocal.m4 | 191 +--
cf | 7 +-
cf.cmake | 7 +-
compile | 8 +-
config.guess | 559 +++----
config.h.cmake.in | 159 +-
config.h.cmake.in.old-works | 50 -
config.h.in | 113 +-
config.sub | 249 ++-
configure | 1266 +++------------
configure.ac | 149 +-
dap4_test/Makefile.in | 74 +-
debian/changelog | 8 +-
debian/libnetcdf13.symbols | 24 +-
debian/patches/big-endian.patch | 15 -
debian/patches/hdf5-library-path.patch | 8 +-
debian/patches/link-private.patch | 2 +-
debian/patches/series | 1 -
debian/source/lintian-overrides | 4 +
depcomp | 8 +-
docs/Doxyfile.developer | 2 +-
docs/Makefile.am | 2 +-
docs/Makefile.in | 20 +-
docs/filters.md | 34 +-
docs/images/Makefile.in | 16 +-
docs/indexing.dox | 218 +++
docs/windows-binaries.md | 26 +-
examples/C/Makefile.am | 14 +-
examples/C/Makefile.in | 139 +-
examples/C/filter_example.c | 2 +-
examples/C/hdf5plugins/.gitignore | 11 +
examples/C/hdf5plugins/CMakeLists.txt | 6 -
examples/C/hdf5plugins/H5Zbzip2.c | 181 ---
examples/C/hdf5plugins/Makefile.am | 2 +-
examples/C/hdf5plugins/Makefile.in | 71 +-
examples/C/hdf5plugins/blocksort.c | 1094 -------------
examples/C/hdf5plugins/bzlib.c | 1572 -------------------
examples/C/hdf5plugins/bzlib.h | 282 ----
examples/C/hdf5plugins/bzlib_private.h | 509 ------
examples/C/hdf5plugins/compress.c | 672 --------
examples/C/hdf5plugins/crctable.c | 104 --
examples/C/hdf5plugins/decompress.c | 646 --------
examples/C/hdf5plugins/h5bzip2.h | 30 -
examples/C/hdf5plugins/huffman.c | 205 ---
examples/C/hdf5plugins/randtable.c | 84 -
examples/C/run_nc4_valgrind_tests.sh | 24 -
examples/C/run_valgrind_tests.sh | 24 -
examples/CDL/Makefile.in | 18 +-
examples/Makefile.in | 18 +-
h5_test/Makefile.am | 13 +-
h5_test/Makefile.in | 191 ++-
h5_test/run_valgrind_tests.sh | 29 -
hdf4_test/CMakeLists.txt | 16 +
hdf4_test/Makefile.am | 37 +
{nctest => hdf4_test}/Makefile.in | 262 ++--
{nc_test4 => hdf4_test}/ref_chunked.hdf4 | Bin
{nc_test4 => hdf4_test}/ref_contiguous.hdf4 | Bin
hdf4_test/run_formatx_hdf4.sh | 51 +
{nc_test4 => hdf4_test}/run_get_hdf4_files.sh | 2 +-
{nc_test4 => hdf4_test}/tst_chunk_hdf4.c | 0
{nc_test4 => hdf4_test}/tst_h4_lendian.c | 1 -
{nc_test4 => hdf4_test}/tst_interops2.c | 2 +-
{nc_test4 => hdf4_test}/tst_interops3.c | 1 -
include/Makefile.am | 14 +-
include/Makefile.in | 23 +-
include/hdf4dispatch.h | 276 ++++
include/nc3dispatch.h | 5 +-
include/nc3internal.h | 32 +-
include/nc4internal.h | 1 +
include/nc_tests.h | 1 +
include/ncdispatch.h | 10 +-
include/nchashmap.h | 113 +-
include/nclist.h | 16 +-
include/nclistmap.h | 100 ++
include/netcdf.h | 7 +-
include/netcdf_meta.h.in | 2 +-
include/onstack.h | 2 +-
install-sh | 45 +-
libdap2/Makefile.in | 126 +-
libdap2/dapdump.c | 4 +-
libdap2/dapincludes.h | 1 -
libdap2/ncd2dispatch.c | 21 +-
libdap2/ncd2dispatch.h | 6 +-
libdap4/Makefile.in | 156 +-
libdap4/d4chunk.c | 2 +-
libdap4/d4curlfunctions.c | 6 +-
libdap4/d4varx.c | 2 +-
libdap4/ncd4dispatch.c | 2 +-
libdispatch/Makefile.in | 277 +++-
libdispatch/ddim.c | 3 +-
libdispatch/derror.c | 2 +
libdispatch/dfile.c | 148 +-
libdispatch/dfilter.c | 2 +-
libdispatch/drc.c | 55 +-
libdispatch/dvar.c | 209 +--
libdispatch/ncbytes.c | 6 +-
libdispatch/nchashmap.c | 2094 +++++++++++++++++++++++--
libdispatch/nclist.c | 41 +-
libdispatch/nclistmgr.c | 5 +
libhdf4/CMakeLists.txt | 17 +
libhdf4/Makefile.am | 25 +
{libsrcp => libhdf4}/Makefile.in | 130 +-
libhdf4/hdf4attr.c | 69 +
libhdf4/hdf4dim.c | 44 +
libhdf4/hdf4dispatch.c | 134 ++
libhdf4/hdf4file.c | 713 +++++++++
libsrc4/ncfunc.c => libhdf4/hdf4func.c | 63 +-
libhdf4/hdf4grp.c | 53 +
libhdf4/hdf4type.c | 309 ++++
libhdf4/hdf4var.c | 379 +++++
liblib/CMakeLists.txt | 4 +
liblib/Makefile.am | 8 +-
liblib/Makefile.in | 68 +-
liblib/nc_initialize.c | 8 +
libnetcdf.settings.in | 2 +-
libsrc/CMakeLists.txt | 1 +
libsrc/Makefile.in | 134 +-
libsrc/attr.c | 1396 +++++++++--------
libsrc/attr.m4 | 30 +-
libsrc/nc3dispatch.c | 12 +-
libsrc/nc3internal.c | 120 +-
libsrc/posixio.c | 4 -
libsrc/putget.c | 4 -
libsrc/putget.m4 | 4 -
libsrc/v1hpg.c | 28 +-
libsrc/var.c | 115 +-
libsrc4/Makefile.in | 111 +-
libsrc4/nc4attr.c | 1055 ++++++-------
libsrc4/nc4dim.c | 211 +--
libsrc4/nc4dispatch.c | 4 +-
libsrc4/nc4file.c | 558 +------
libsrc4/nc4grp.c | 4 +-
libsrc4/nc4hdf.c | 99 +-
libsrc4/nc4internal.c | 32 +-
libsrc4/nc4var.c | 121 +-
libsrc4/ncfunc.c | 14 +-
libsrcp/Makefile.in | 51 +-
libsrcp/ncpdispatch.c | 19 +-
missing | 14 +-
nc_test/CMakeLists.txt | 2 +-
nc_test/Makefile.am | 38 +-
nc_test/Makefile.in | 397 +++--
nc_test/bad_cdf5_begin.nc | Bin 0 -> 220 bytes
nc_test/run_cdf5.sh | 6 +
nc_test/run_valgrind_tests.sh | 29 -
nc_test/test_write.c | 17 +
nc_test/test_write.m4 | 17 +
nc_test/tst_cdf5_begin.c | 56 +
nc_test/tst_def_var_fill.c | 151 ++
nc_test/tst_meta.c | 7 +
nc_test/tst_names.c | 15 +-
nc_test/tst_open_cdf5.c | 25 +
nc_test/util.c | 4 -
nc_test4/CMakeLists.txt | 21 +-
nc_test4/Makefile.am | 72 +-
nc_test4/Makefile.in | 718 +++++----
nc_test4/hdf5plugins/CMakeLists.txt | 13 +-
nc_test4/hdf5plugins/H5Zmisc.c | 11 +-
nc_test4/hdf5plugins/Makefile.am | 4 +-
nc_test4/hdf5plugins/Makefile.in | 77 +-
nc_test4/run_chunk_hdf4.sh | 26 -
nc_test4/run_hdf4_valgrind_tests.sh | 25 -
nc_test4/run_valgrind_tests.sh | 32 -
nc_test4/run_valgrind_tests2.sh | 23 -
nc_test4/test_filter_misc.c | 7 +-
nc_test4/tst_atts.c | 357 ++++-
nc_test4/tst_atts2.c | 13 +-
nc_test4/tst_chunks.c | 120 +-
nc_test4/tst_dims.c | 430 +++--
nc_test4/tst_filter.sh | 83 +-
nc_test4/tst_filterparser.c | 9 +-
nc_test4/tst_formatx_hdf4.sh | 32 -
nc_test4/tst_grps.c | 6 +-
nc_test4/tst_h5_endians.c | 4 +-
nc_test4/tst_hdf4_read_var.sh | 27 -
nc_test4/tst_nc_test_file.c | 33 -
nc_test4/tst_put_vars_two_unlim_dim.c | 1 +
nc_test4/tst_rehash.c | 3 +-
nc_test4/tst_rename.c | 147 +-
nc_test4/tst_rename2.c | 140 ++
nc_test4/tst_strings.c | 219 ++-
nc_test4/tst_types.c | 2 +-
nc_test4/tst_vars.c | 73 +-
nc_test4/tst_vars2.c | 205 ++-
ncdap_test/Makefile.in | 100 +-
ncdap_test/expected3/Makefile.in | 16 +-
ncdap_test/expectremote3/Makefile.in | 16 +-
ncdap_test/testdata3/Makefile.in | 16 +-
ncdump/Makefile.am | 4 +
ncdump/Makefile.in | 228 ++-
ncdump/cdl/Makefile.in | 16 +-
ncdump/expected/Makefile.in | 16 +-
ncdump/nccopy.c | 167 +-
ncgen/Makefile.in | 144 +-
ncgen/genbin.c | 4 +-
ncgen/genlib.c | 2 +
ncgen/ncgen.y | 18 +-
ncgen/ncgeny.c | 618 ++++----
ncgen/ncgeny.h | 2 +-
ncgen3/Makefile.in | 87 +-
nctest/Makefile.am | 8 +-
nctest/Makefile.in | 146 +-
nctest/run_valgrind_tests.sh | 28 -
oc2/Makefile.in | 124 +-
test-driver | 8 +-
test_common.in | 4 +-
213 files changed, 12488 insertions(+), 12907 deletions(-)
create mode 100644 .github/CODEOWNERS
create mode 100644 CODE_OF_CONDUCT.md
delete mode 100644 debian/patches/big-endian.patch
create mode 100644 debian/source/lintian-overrides
create mode 100644 docs/indexing.dox
create mode 100644 examples/C/hdf5plugins/.gitignore
delete mode 100644 examples/C/hdf5plugins/H5Zbzip2.c
delete mode 100644 examples/C/hdf5plugins/blocksort.c
delete mode 100644 examples/C/hdf5plugins/bzlib.c
delete mode 100644 examples/C/hdf5plugins/bzlib.h
delete mode 100644 examples/C/hdf5plugins/bzlib_private.h
delete mode 100644 examples/C/hdf5plugins/compress.c
delete mode 100644 examples/C/hdf5plugins/crctable.c
delete mode 100644 examples/C/hdf5plugins/decompress.c
delete mode 100644 examples/C/hdf5plugins/h5bzip2.h
delete mode 100644 examples/C/hdf5plugins/huffman.c
delete mode 100644 examples/C/hdf5plugins/randtable.c
delete mode 100755 examples/C/run_nc4_valgrind_tests.sh
delete mode 100755 examples/C/run_valgrind_tests.sh
delete mode 100755 h5_test/run_valgrind_tests.sh
create mode 100644 hdf4_test/CMakeLists.txt
create mode 100644 hdf4_test/Makefile.am
copy {nctest => hdf4_test}/Makefile.in (82%)
rename {nc_test4 => hdf4_test}/ref_chunked.hdf4 (100%)
rename {nc_test4 => hdf4_test}/ref_contiguous.hdf4 (100%)
create mode 100755 hdf4_test/run_formatx_hdf4.sh
rename {nc_test4 => hdf4_test}/run_get_hdf4_files.sh (91%)
rename {nc_test4 => hdf4_test}/tst_chunk_hdf4.c (100%)
rename {nc_test4 => hdf4_test}/tst_h4_lendian.c (99%)
rename {nc_test4 => hdf4_test}/tst_interops2.c (98%)
rename {nc_test4 => hdf4_test}/tst_interops3.c (99%)
create mode 100644 include/hdf4dispatch.h
create mode 100644 include/nclistmap.h
create mode 100644 libhdf4/CMakeLists.txt
create mode 100644 libhdf4/Makefile.am
copy {libsrcp => libhdf4}/Makefile.in (83%)
create mode 100644 libhdf4/hdf4attr.c
create mode 100644 libhdf4/hdf4dim.c
create mode 100644 libhdf4/hdf4dispatch.c
create mode 100644 libhdf4/hdf4file.c
copy libsrc4/ncfunc.c => libhdf4/hdf4func.c (52%)
create mode 100644 libhdf4/hdf4grp.c
create mode 100644 libhdf4/hdf4type.c
create mode 100644 libhdf4/hdf4var.c
create mode 100644 nc_test/bad_cdf5_begin.nc
create mode 100755 nc_test/run_cdf5.sh
delete mode 100755 nc_test/run_valgrind_tests.sh
create mode 100644 nc_test/tst_cdf5_begin.c
create mode 100644 nc_test/tst_def_var_fill.c
create mode 100644 nc_test/tst_open_cdf5.c
delete mode 100755 nc_test4/run_chunk_hdf4.sh
delete mode 100755 nc_test4/run_hdf4_valgrind_tests.sh
delete mode 100755 nc_test4/run_valgrind_tests.sh
delete mode 100755 nc_test4/run_valgrind_tests2.sh
delete mode 100755 nc_test4/tst_formatx_hdf4.sh
delete mode 100755 nc_test4/tst_hdf4_read_var.sh
delete mode 100644 nc_test4/tst_nc_test_file.c
create mode 100644 nc_test4/tst_rename2.c
delete mode 100755 nctest/run_valgrind_tests.sh
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