Hi Nina,

This is very important for the community.
If you want to check graph layouting applied to cancer research this is a
good project to grab ideas from:
http://bioinfo-out.curie.fr/projects/dedal/#downloads

And you can browse Cytoscape apps for more : http://apps.cytoscape.org/

Cheers,

Hernán


El sáb., 11 may. 2019 a las 7:18, Nina Medic (<medicka...@gmail.com>)
escribió:

> Hello,
> I am Nina, and I am a student from Serbia. Currently I am on the second
> year, of my master studies in Computer science. I have been working with
> Pharo for more than a year now. As a project in one of my classes, I was
> implementing a program that parses graphs and makes a visualization of
> them. Last semester I followed MOOC for Pharo.
>
> A couple of days ago, I was fortunate enough to be accepted for this year
> Google Summer of Code. The project I will be working on is called *Graph
> library with layouting algorithm*. What I will do is implement the graph
> structure with all necessary parts in one separate library. Beside that I
> will include layouthing algorithms. Some of which are already implemented
> as a part of some other projects and packages, those I will pull out. For
> the other ones, I will be using doctoral dissertation from Vaderna Renata
> titled *Algorithms and a language for the support of automatically laying
> out diagram elements*. You can find my proposal here:
>
> https://docs.google.com/document/d/1V8_HaZnxYsCfaiZs4vI1C5Dh4TvRPz-H51aYOuY9lFA/edit?usp=sharing
>
>  I would like to know, what are you thinking about this project. How
> important is for the community?
>
> One of fellow students from GSoC (we are both working for Pharo
> consortium) and I are considering using the same blog. What do you think
> about that? I will be also posting about my progress on Twitter:
> https://twitter.com/medicka992 which will make it easy for everybody to
> follow my work.
>
> I am looking forward to working on this project and with all of you.
>
> Sincerely,
> Nina.
>

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