It seems that the hardware may in fact be the issue.

I ran the exact same process during the night on a much slower machine (4 core 
Xeon E5-1620 v4 32G Ram) and it worked fine. It did not crash and completed all 
the updates on 113 million records successfully.

I will be bringing the i9 in for a checkup to find the problem.

Thank you all for your help with this issue.

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