Hello psql community,

I have been using Python to deal with CRUD of the database. I have discovered that there are some issues when dealing with long queries (either SELECT or COPY, since it is somewhat big data). The connection is dropped by the 2~3 hours mark and I have no idea what is wrong. There is no knowledge on how my workstation is connected to the server.

But I managed to work around the issue by putting a few parameters in psycopg2:

   conn = psycopg2.connect(host=“someserver.hk”,
   port=12345,
   dbname=“ohdsi”,
   user=“admin”,
   password=“admin1”,
   options="-c search_path="+schema,
   # it seems the below lines are needed to keep the connection alive.
   connect_timeout=10,
   keepalives=1,
   keepalives_idle=5,
   keepalives_interval=2,
   keepalives_count=5)

It looks like that few keepalives* parameter kept the connection alive so the long queries can run day and night.

The problem now is that, I am forced to use R and JDBC to deal with a bunch of codes, because there are a lot of analyses written in R. The issue that a long query would be dropped around the 2~3 hours mark showed up again in R/JDBC. How can I work around that?

I have tried putting /tcpKeepAlive=true /in the link but it seems to have mixed results. Do I also have to put /tcp_keepalives_interval/ or /tcp_keepalives_count/? What are some recommend values in these parameters?

Are there any other possible solutions?/

Thanks/


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