I have no further specific advice to offer. Someone more familiar with the
relevant source code will have to do it. -- Darren Duncan
On 2017-07-14 2:21 PM, Conor McNally wrote:
Hi Darren,
Thanks for the tip. I upgraded to pgAdmin 4 v1.6 and tried again.
Immediately BEFORE running the pgAdmin backup tool the symbolic links look like
this:
ls -l /usr/local/lib/ | grep postg
lrwxr-xr-x 1 conor admin 48 29 Jun 21:06 libecpg.6.8.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.6.8.dylib
lrwxr-xr-x 1 conor admin 46 29 Jun 21:06 libecpg.6.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.6.dylib
lrwxr-xr-x 1 conor admin 40 29 Jun 21:06 libecpg.a ->
../Cellar/postgresql/9.6.2/lib/libecpg.a
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libecpg.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.dylib
lrwxr-xr-x 1 conor admin 55 29 Jun 21:06 libecpg_compat.3.8.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.3.8.dylib
lrwxr-xr-x 1 conor admin 53 29 Jun 21:06 libecpg_compat.3.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.3.dylib
lrwxr-xr-x 1 conor admin 47 29 Jun 21:06 libecpg_compat.a ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.a
lrwxr-xr-x 1 conor admin 51 29 Jun 21:06 libecpg_compat.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.dylib
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libpgcommon.a ->
../Cellar/postgresql/9.6.2/lib/libpgcommon.a
lrwxr-xr-x 1 conor admin 45 29 Jun 21:06 libpgfeutils.a ->
../Cellar/postgresql/9.6.2/lib/libpgfeutils.a
lrwxr-xr-x 1 conor admin 42 29 Jun 21:06 libpgport.a ->
../Cellar/postgresql/9.6.2/lib/libpgport.a
lrwxr-xr-x 1 conor admin 51 29 Jun 21:06 libpgtypes.3.7.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.3.7.dylib
lrwxr-xr-x 1 conor admin 49 29 Jun 21:06 libpgtypes.3.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.3.dylib
lrwxr-xr-x 1 conor admin 43 29 Jun 21:06 libpgtypes.a ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.a
lrwxr-xr-x 1 conor admin 47 29 Jun 21:06 libpgtypes.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.dylib
lrwxr-xr-x 1 conor admin 46 29 Jun 21:06 libpq.5.9.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.5.9.dylib
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libpq.5.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.5.dylib
lrwxr-xr-x 1 conor admin 38 29 Jun 21:06 libpq.a ->
../Cellar/postgresql/9.6.2/lib/libpq.a
lrwxr-xr-x 1 conor admin 42 29 Jun 21:06 libpq.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.dylib
lrwxr-xr-x 1 conor admin 41 29 Jun 21:06 postgresql ->
../Cellar/postgresql/9.6.2/lib/postgresql
Immediately AFTER running the pgAdmin backup tool (to take a plain text dump of
the schema) I have this:
ls -l /usr/local/lib/ | grep postg
lrwxr-xr-x 1 conor admin 48 29 Jun 21:06 libecpg.6.8.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.6.8.dylib
lrwxr-xr-x 1 conor admin 46 29 Jun 21:06 libecpg.6.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.6.dylib
lrwxr-xr-x 1 conor admin 40 29 Jun 21:06 libecpg.a ->
../Cellar/postgresql/9.6.2/lib/libecpg.a
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libecpg.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg.dylib
lrwxr-xr-x 1 conor admin 55 29 Jun 21:06 libecpg_compat.3.8.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.3.8.dylib
lrwxr-xr-x 1 conor admin 53 29 Jun 21:06 libecpg_compat.3.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.3.dylib
lrwxr-xr-x 1 conor admin 47 29 Jun 21:06 libecpg_compat.a ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.a
lrwxr-xr-x 1 conor admin 51 29 Jun 21:06 libecpg_compat.dylib ->
../Cellar/postgresql/9.6.2/lib/libecpg_compat.dylib
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libpgcommon.a ->
../Cellar/postgresql/9.6.2/lib/libpgcommon.a
lrwxr-xr-x 1 conor admin 45 29 Jun 21:06 libpgfeutils.a ->
../Cellar/postgresql/9.6.2/lib/libpgfeutils.a
lrwxr-xr-x 1 conor admin 42 29 Jun 21:06 libpgport.a ->
../Cellar/postgresql/9.6.2/lib/libpgport.a
lrwxr-xr-x 1 conor admin 51 29 Jun 21:06 libpgtypes.3.7.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.3.7.dylib
lrwxr-xr-x 1 conor admin 49 29 Jun 21:06 libpgtypes.3.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.3.dylib
lrwxr-xr-x 1 conor admin 43 29 Jun 21:06 libpgtypes.a ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.a
lrwxr-xr-x 1 conor admin 47 29 Jun 21:06 libpgtypes.dylib ->
../Cellar/postgresql/9.6.2/lib/libpgtypes.dylib
lrwxr-xr-x 1 conor admin 46 29 Jun 21:06 libpq.5.9.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.5.9.dylib
lrwxr-xr-x 1 conor admin 44 29 Jun 21:06 libpq.5.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.5.dylib
lrwxr-xr-x 1 conor admin 38 29 Jun 21:06 libpq.a ->
../Cellar/postgresql/9.6.2/lib/libpq.a
lrwxr-xr-x 1 conor admin 42 29 Jun 21:06 libpq.dylib ->
../Cellar/postgresql/9.6.2/lib/libpq.dylib
lrwxrwxrwx 1 conor admin 49 14 Jul 22:00 postgresql ->
/usr/local/Cellar/postgresql/9.5.3/lib/postgresql
So something has downgraded the last entry in the list and version number no
longer matches the other libraries.
Any ideas why this should be? As mentioned previously I have installed (and
upgraded) postgres via brew, and pgAdmin by drag&drop from the dmg into my
applications folder. Originally I did have a EnterpriseDB build of Postgres
installed, but I deleted that some time ago when I switched to brew.
Thanks for any further advice you can give.
Kind regards,
Conor McNally
On Fri, Jun 30, 2017 at 12:18 AM, Darren Duncan <dar...@darrenduncan.net
<mailto:dar...@darrenduncan.net>> wrote:
On 2017-06-29 1:06 PM, Conor McNally wrote:
By 'no longer working' it means that the postrges libraries have been
messed up
and I get the following error when I try to connect via pyscopg2 (python
v3.5.2_3, pyscopg2 v2.6.2):
File
"/Users/conor/virt_env/conor/lib/python3.5/site-packages/psycopg2/extras.py",
line 288, in execute
return super(NamedTupleCursor, self).execute(query, vars)
psycopg2.InternalError: could not load library
"/usr/local/lib/postgresql/plpgsql.so":
dlopen(/usr/local/lib/postgresql/plpgsql.so, 10): Symbol not found:
_DatumIsReadWriteExpandedObject
Referenced from: /usr/local/lib/postgresql/plpgsql.so
Expected in: /usr/local/opt/postgresql/bin/postgres
in /usr/local/lib/postgresql/plpgsql.so
I find the only way to fix the problem is to run "brew switch postgresql
9.6.2". I don't really know what that command does but the database
connections
are OK after I run it. Also, the database backup file has been created
successfully as far as I can tell: I have not yet attempted to restore
it. One
other thing is I don't get a confirmation message in the pgAdmin console
the way
I used to.
I'll tell you what that command does.
I have some experience with perlbrew/brew, which is a package manager of
sorts that supports having multiple concurrent installations of different
versions of something, and also or typically builds from source.
The "switch" command basically updates some symlinks for some installed
thing so that a specific version is referenced by them. For example, if you
had versions X and Y of package Foo installed, you use "brew switch" to
indicate that when you invoke "Foo" you get either version X or Y.
$ brew help switch
brew switch name version:
Symlink all of the specific version of name's install to Homebrew
prefix.
It would appear that something was changing your symlinks. Or possibly a
local shell path was being altered.
I can't tell you what is making these changes though.
-- Darren Duncan