In your configure.log, I see --with-mpi=0, so I’m surprised this is even running, and even more surprised that you are encountering OpenMPI errors. Is this from a different build?
Thanks, Pierre > On 12 Sep 2021, at 7:18 PM, Antonio T. sagitter <[email protected]> > wrote: > > Okay. I will try to set correctly the DATAFILESPATH options. > > I see even this error: > > not ok vec_is_sf_tutorials-ex1_4+sf_window_sync-fence_sf_window_flavor-create > # Error code: 68 > > # PetscSF Object: 4 MPI processes > > # type: window > > # [0] Number of roots=3, leaves=2, remote ranks=2 > > # [0] 0 <- (3,1) > > # [0] 1 <- (1,0) > > # [1] Number of roots=2, leaves=3, remote ranks=2 > > # [1] 0 <- (0,1) > > # [1] 1 <- (2,0) > > # [1] 2 <- (0,2) > > # [2] Number of roots=2, leaves=3, remote ranks=3 > > # [2] 0 <- (1,1) > > # [2] 1 <- (3,0) > > # [2] 2 <- (0,2) > > # [3] Number of roots=2, leaves=3, remote ranks=2 > > # [3] 0 <- (2,1) > > # [3] 1 <- (0,0) > > # [3] 2 <- (0,2) > > # [0] Roots referenced by my leaves, by rank > > # [0] 1: 1 edges > > # [0] 1 <- 0 > > # [0] 3: 1 edges > > # [0] 0 <- 1 > > # [1] Roots referenced by my leaves, by rank > > # [1] 0: 2 edges > > # [1] 0 <- 1 > > # [1] 2 <- 2 > > # [1] 2: 1 edges > > # [1] 1 <- 0 > > # [2] Roots referenced by my leaves, by rank > > # [2] 0: 1 edges > > # [2] 2 <- 2 > > # [2] 1: 1 edges > > # [2] 0 <- 1 > > # [2] 3: 1 edges > > # [2] 1 <- 0 > > # [3] Roots referenced by my leaves, by rank > > # [3] 0: 2 edges > > # [3] 1 <- 0 > > # [3] 2 <- 2 > > # [3] 2: 1 edges > > # [3] 0 <- 1 > > # current flavor=CREATE synchronization=FENCE MultiSF sort=rank-order > > # current info=MPI_INFO_NULL > > # [buildhw-x86-09:1135574] *** An error occurred in MPI_Accumulate > > # [buildhw-x86-09:1135574] *** reported by process [3562602497,3] > > # [buildhw-x86-09:1135574] *** on win rdma window 4 > > # [buildhw-x86-09:1135574] *** MPI_ERR_RMA_RANGE: invalid RMA address > range > > # [buildhw-x86-09:1135574] *** MPI_ERRORS_ARE_FATAL (processes in this > win will now abort, > > # [buildhw-x86-09:1135574] *** and potentially your MPI job) > > # [buildhw-x86-09.iad2.fedoraproject.org:1135567] 3 more processes have > sent help message help-mpi-errors.txt / mpi_errors_are_fatal > > # [buildhw-x86-09.iad2.fedoraproject.org:1135567] Set MCA parameter > "orte_base_help_aggregate" to 0 to see all help / error messages > > Looks like an error related to OpenMPI-4*: > https://github.com/open-mpi/ompi/issues/6374 > > Thank you. > > On 9/12/21 18:09, Pierre Jolivet wrote: >> Hello, >> Did you copy the files from https://gitlab.com/petsc/datafiles >> <https://gitlab.com/petsc/datafiles> before the make check? >> cfd.1.10 is not part of https://gitlab.com/petsc/petsc >> <https://gitlab.com/petsc/petsc>, so you either need to copy the files from >> the datafiles repository, or remove the >> --DATAFILESPATH=/home/sagitter/rpmbuild/BUILD/petsc-3.15.4/petsc-3.15.4/share/petsc/datafiles >> configure option. >> Thanks, >> Pierre >>> On 12 Sep 2021, at 6:02 PM, Antonio T. sagitter <[email protected] >>> <mailto:[email protected]>> wrote: >>> >>> Hi all. >>> >>> This error is repeated when the tests are compiled in PETSc-3.15.4 >>> compilation: >>> https://paste.in/MhdNjf <https://paste.in/MhdNjf> >>> >>> This happens in Fedora 34 x86_64 with gcc-11.2.1 >>> >>> make.log and configure.log are attached >>> -- >>> --- >>> Antonio Trande >>> Fedora Project >>> mailto: [email protected] >>> GPG key: 0x29FBC85D7A51CC2F >>> GPG key server: https://keyserver1.pgp.com/ >>> <make_configure.zip><OpenPGP_0x29FBC85D7A51CC2F.asc> > > -- > --- > Antonio Trande > Fedora Project > mailto: [email protected] > GPG key: 0x29FBC85D7A51CC2F > GPG key server: https://keyserver1.pgp.com/
