Hi, Andi Bauer,
I found that annotate time filter works in live visualization and the error
occurs when output rendering components is activated.
gdb says the error occurs at vtkSMBoundsDomain.cxx: 60
vtkPVDataInformation* info = this->GetInputInformation();
if (info)
{
double bounds[6];
info->GetBounds(bounds);
this->SetDomainValues(bounds);
}
and the vtkPVDataInformation has the following information:
members of vtkPVDataInformation:
DataSetType = 19,
CompositeDataSetType = -1,
NumberOfDataSets = 1,
NumberOfPoints = 0,
NumberOfCells = 1,
NumberOfRows = 1,
MemorySize = 1,
PolygonCount = 0,
Bounds = {1.0000000000000001e+299, -1.0000000000000001e+299,
1.0000000000000001e+299, -1.0000000000000001e+299, 1.0000000000000001e+299,
-1.0000000000000001e+299},
Extent = {2147483647, -2147483647, 2147483647, -2147483647, 2147483647,
-2147483647},
TimeSpan = {-1.0000000000000001e+299, 1.0000000000000001e+299},
Time = 0.0050000000000000001,
HasTime = 1,
NumberOfTimeSteps = 0,
DataClassName = 0x55555996b050 "vtkTable",
TimeLabel = 0x0,
CompositeDataClassName = 0x0,
CompositeDataSetName = 0x0,
PointDataInformation = 0x555558ec6430,
CellDataInformation = 0x555558ec66d0,
FieldDataInformation = 0x555558ec6770,
VertexDataInformation = 0x555558ec6890,
EdgeDataInformation = 0x555558ec67f0,
RowDataInformation = 0x555558ec6370,
CompositeDataInformation = 0x555558eb5430,
PointArrayInformation = 0x555558ec6c50,
PortNumber = 0
my guess is that annotate time filter is a type of vtkTable and Bounds member
variable has too large values. Any idea?
Regards
SeongMo
On 2018년 1월 27일 AM 2:06 +0900, Andy Bauer <[email protected]>, wrote:
> Hi SeongMo,
>
> The AnnotateTime source should work with Catalyst. See the attached images
> and the annotatetime.py script which I used to create it.
>
> With your script, what do your images look like?
>
> You could also try what Ufuk mentioned. I think his work is based on
> weather/climate time scales so he has to handle months, leap years, etc.
> which ParaView itself doesn't handle naturally. You can see some of the
> things he's done with Catalyst at
> https://blog.kitware.com/integration-of-paraview-catalyst-with-regional-earth-system-model/.
>
> Best,
> Andy
>
> > On Thu, Jan 25, 2018 at 10:47 AM, SeongMo <[email protected]> wrote:
> > > Dear Andy Bauer,
> > > For the color map issue, I think ParaView 5.4.1 resolved it. But, I could
> > > not figure out annotate time filter issue. may be it is just simple
> > > problem but I am not sure. Coprocess routine is as follows and python
> > > script is attached.
> > > It would be appreciated if you make some advice.
> > >
> > > void CoProcess(Foam::fvMesh& mesh, Foam::Time& runTime)
> > > {
> > > vtkNew<vtkCPDataDescription> dataDescription;
> > > dataDescription->AddInput("input");
> > > const double time = runTime.value();
> > > const unsigned int timeStep = runTime.timeIndex();
> > > dataDescription->SetTimeData(time, timeStep);
> > >
> > > if (runTime.end())
> > > {
> > > // assume that we want to all the pipelines to execute
> > > // if it is the last time step
> > > dataDescription->ForceOutputOn();
> > > }
> > > if
> > > (Processor->RequestDataDescription(dataDescription.GetPointer()) != 0)
> > > {
> > > Foam::polyMesh::readUpdateState meshState = mesh.readUpdate();
> > >
> > > if(meshState != Foam::polyMesh::UNCHANGED)
> > > {
> > > // mesh moved? or mesh topology changed?
> > > BuildVTKGrid(mesh, true);
> > > }
> > > UpdateVTKAttributes(mesh);
> > > dataDescription->GetInputDescriptionByName("input")->
> > > SetGrid(multiBlockDataSet);
> > > Processor->CoProcess(dataDescription.GetPointer());
> > > }
> > > }
> > > Regards.
> > > SeongMo
> > > SeongMo Yeon, Ph.D, Senior Engineer
> > > Offshore Hydrodynamics Research
> > > SAMSUNG HEAVY INDUSTRIES CO., LTD.
> > > Central Research Institute
> > > E-mail : [email protected]
> > > Tel :
> > > --------------------------------------------------------
> > > Fluctuat nec mergitur
> > > On 01/25/2018 06:56 AM, Andy Bauer wrote:
> > > > Hi Seongmo,
> > > >
> > > > Please keep the conversations on the mailing list so that anyone can
> > > > follow along or participate. Also, these types of things often get lost
> > > > in my inbox when they don't make it back to the ParaView mailing list.
> > > >
> > > > What version of ParaView Catalyst are you using? I think the annotate
> > > > time filter should work with Catalyst but I haven't verified that. I
> > > > vaguely remember others using that filter with Catalyst though. Also, I
> > > > think the colormap bug was fixed. If you have a way of sharing a sample
> > > > that demonstrates either of those bugs I can try taking a look at the
> > > > issue.
> > > >
> > > > Best,
> > > > Andy
> > > >
> > > > > On Thu, Jan 18, 2018 at 6:40 PM, Seong Mo Yeon
> > > > > <[email protected]> wrote:
> > > > > > Dear Andy Bauer
> > > > > >
> > > > > > I have a quick question.
> > > > > > Is it possible to have annotate time filter processed in catalyst
> > > > > > adaptor? Current my code cannot that filter.
> > > > > >
> > > > > > BTW, image extracted from catalyst looks different from render view
> > > > > > of paraview at the time of writing a script. e.g., pressure
> > > > > > colormap legend is missing.
> > > > > >
> > > > > > Regards
> > > > > > Seongmo
> > > > > >
> > > > > > On 2018년 1월 18일 AM 1:17 +0900, Andy Bauer <[email protected]>,
> > > > > > wrote:
> > > > > > > Hi,
> > > > > > >
> > > > > > > My guess is that the TimeStep isn't getting set properly in the
> > > > > > > adaptor (though it looks like it should be in
> > > > > > > "dataDescription->SetTimeData(runTime.value(),
> > > > > > > runTime.deltaTValue());"). My suggestion would be to add in the
> > > > > > > following to either the RequestDataDescription() or
> > > > > > > DoCoProcessing() methods in the python script to see what
> > > > > > > Catalyst thinks the time step is:
> > > > > > > print("In script2.py, the data time step is ",
> > > > > > > datadescription.GetTimeStep())
> > > > > > >
> > > > > > >
> > > > > > > > On Wed, Jan 17, 2018 at 9:57 AM, SeongMo
> > > > > > > > <[email protected]> wrote:
> > > > > > > > > Hi,
> > > > > > > > >
> > > > > > > > > I wrote a OpenFOAM adaptor for Catalyst.
> > > > > > > > >
> > > > > > > > > In the ParaView, the connection is made good and shows
> > > > > > > > > filtered flow field as written in the python script.
> > > > > > > > >
> > > > > > > > > However, filename_%t and image_%t is not expanded as time
> > > > > > > > > marching but just write filename_0 and image_0.png.
> > > > > > > > >
> > > > > > > > > As far as I know, %t should be replaced with current time as
> > > > > > > > > given in dataDescription->SetTimeData.
> > > > > > > > >
> > > > > > > > > Any help would be appreciated.
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > FYI, python script is attached and snippet of my OpenFOAM
> > > > > > > > > Adaptor code for Catalyst is as follows:
> > > > > > > > >
> > > > > > > > > // icoFoam.C
> > > > > > > > >
> > > > > > > > > #ifdef USE_CATALYST
> > > > > > > > > Foam::HashTable<string> options = args.options();
> > > > > > > > > IStringStream is(options["scriptList"]);
> > > > > > > > > wordList scriptList = readList<word>(is);
> > > > > > > > > OFAdaptor::Initialize(scriptList, mesh);
> > > > > > > > > #endif
> > > > > > > > > while (runTime.loop())
> > > > > > > > > {
> > > > > > > > > runTime.write();
> > > > > > > > > #ifdef USE_CATALYST
> > > > > > > > > OFAdaptor::CoProcess(mesh, runTime);
> > > > > > > > > #endif
> > > > > > > > > }
> > > > > > > > > #ifdef USE_CATALYST
> > > > > > > > > OFAdaptor::Finalize();
> > > > > > > > > #endif
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > // OFAdaptor.C
> > > > > > > > >
> > > > > > > > > void CoProcess(Foam::fvMesh& mesh, Foam::Time& runTime)
> > > > > > > > > {
> > > > > > > > > vtkNew<vtkCPDataDescription> dataDescription;
> > > > > > > > > dataDescription->AddInput("input");
> > > > > > > > > dataDescription->SetTimeData(runTime.value(),
> > > > > > > > > runTime.deltaTValue());
> > > > > > > > > if (runTime.end())
> > > > > > > > > {
> > > > > > > > > // assume that we want to all the pipelines to
> > > > > > > > > execute
> > > > > > > > > // if it is the last time step
> > > > > > > > > dataDescription->ForceOutputOn();
> > > > > > > > > }
> > > > > > > > > if
> > > > > > > > > (Processor->RequestDataDescription(dataDescription.GetPointer())
> > > > > > > > > != 0)
> > > > > > > > > {
> > > > > > > > > Foam::polyMesh::readUpdateState meshState =
> > > > > > > > > mesh.readUpdate();
> > > > > > > > >
> > > > > > > > > if(meshState != Foam::polyMesh::UNCHANGED)
> > > > > > > > > {
> > > > > > > > > BuildVTKGrid(mesh);
> > > > > > > > > }
> > > > > > > > > UpdateVTKAttributes(mesh);
> > > > > > > > > dataDescription->GetInputDescriptionByName("input")->SetGrid(multiBlockDataSet);
> > > > > > > > > Processor->CoProcess(dataDescription.GetPointer());
> > > > > > > > > }
> > > > > > > > > }
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > --
> > > > > > > > > SeongMo Yeon, Ph.D, Senior Engineer
> > > > > > > > > Offshore Hydrodynamics Research
> > > > > > > > > SAMSUNG HEAVY INDUSTRIES CO., LTD.
> > > > > > > > > Central Research Institute
> > > > > > > > > E-mail : [email protected]
> > > > > > > > > Tel :
> > > > > > > > > --------------------------------------------------------
> > > > > > > > > Fluctuat nec mergitur
> > > > > > > > >
> > > > > > > > >
> > > > > > > > > _______________________________________________
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> > > > > > > > >
> > > > > > > > > Visit other Kitware open-source projects at
> > > > > > > > > http://www.kitware.com/opensource/opensource.html
> > > > > > > > >
> > > > > > > > > Please keep messages on-topic and check the ParaView Wiki at:
> > > > > > > > > http://paraview.org/Wiki/ParaView
> > > > > > > > >
> > > > > > > > > Search the list archives at:
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> > > > > > > > >
> > > > > > >
> > > >
> > >
>
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