When parameters include_path or exclude_path are passed to the rootfs
plugin, it will copy the partition content into a folder and make all
the modifications there.

This is done using copyhardlinktree(), which does not take into
consideration the content of the pseudo folder, which contains the
information about the right permissions and ownership of the folders.

This results in a rootfs owned by the user that is running the wic
command (usually UID 1000), which makes some rootfs unbootable.

This bug can be easily triggerd with the following .wks

part / --source rootfs --fstype=ext4 --exclude-path=home

And this sequence:

$ wic create test-permissions -e core-image-minimal -o test/
$ sudo mount test/test-permissions-202004080823-sda.direct.p1 /mnt
$ ls -la /mnt/etc/shadow

To fix this we copy the content of the pseudo folders to the new folder
and modify the pseudo database using the "pseudo -B" command.

If the rootfs is not a rootfs generated by bitbake a warning is shown
making the user aware that the permissions on the target might not match
what he expects.

WARNING: /tmp/test/../pseudo folder does not exist. Usernames and permissions 
will be invalid

Cc: Paul Barker <pbar...@konsulko.com>
Signed-off-by: Ricardo Ribalda Delgado <rica...@ribalda.com>
---
 scripts/lib/wic/partition.py             |  7 +++--
 scripts/lib/wic/plugins/source/rootfs.py | 35 +++++++++++++++++++++---
 2 files changed, 35 insertions(+), 7 deletions(-)

diff --git a/scripts/lib/wic/partition.py b/scripts/lib/wic/partition.py
index 2d95f78439..b02711be37 100644
--- a/scripts/lib/wic/partition.py
+++ b/scripts/lib/wic/partition.py
@@ -190,7 +190,7 @@ class Partition():
                            (self.mountpoint, self.size, self.fixed_size))
 
     def prepare_rootfs(self, cr_workdir, oe_builddir, rootfs_dir,
-                       native_sysroot, real_rootfs = True):
+                       native_sysroot, real_rootfs = True, pseudo_dir = None):
         """
         Prepare content for a rootfs partition i.e. create a partition
         and fill it from a /rootfs dir.
@@ -198,8 +198,9 @@ class Partition():
         Currently handles ext2/3/4, btrfs, vfat and squashfs.
         """
         p_prefix = os.environ.get("PSEUDO_PREFIX", "%s/usr" % native_sysroot)
-        p_localstatedir = os.environ.get("PSEUDO_LOCALSTATEDIR",
-                                         "%s/../pseudo" %  rootfs_dir)
+        if (pseudo_dir == None):
+            pseudo_dir = "%s/../pseudo" %  rootfs_dir
+        p_localstatedir = os.environ.get("PSEUDO_LOCALSTATEDIR", pseudo_dir)
         p_passwd = os.environ.get("PSEUDO_PASSWD", rootfs_dir)
         p_nosymlinkexp = os.environ.get("PSEUDO_NOSYMLINKEXP", "1")
         pseudo = "export PSEUDO_PREFIX=%s;" % p_prefix
diff --git a/scripts/lib/wic/plugins/source/rootfs.py 
b/scripts/lib/wic/plugins/source/rootfs.py
index 705aeb5563..f161d1eae0 100644
--- a/scripts/lib/wic/plugins/source/rootfs.py
+++ b/scripts/lib/wic/plugins/source/rootfs.py
@@ -16,11 +16,11 @@ import os
 import shutil
 import sys
 
-from oe.path import copyhardlinktree
+from oe.path import copyhardlinktree, copytree
 
 from wic import WicError
 from wic.pluginbase import SourcePlugin
-from wic.misc import get_bitbake_var
+from wic.misc import get_bitbake_var, exec_native_cmd
 
 logger = logging.getLogger('wic')
 
@@ -44,6 +44,15 @@ class RootfsPlugin(SourcePlugin):
 
         return os.path.realpath(image_rootfs_dir)
 
+    @staticmethod
+    def __get_pseudo(native_sysroot, rootfs, pseudo_dir):
+        pseudo = "export PSEUDO_PREFIX=%s/usr;" % native_sysroot
+        pseudo += "export PSEUDO_LOCALSTATEDIR=%s;" % pseudo_dir
+        pseudo += "export PSEUDO_PASSWD=%s;" % rootfs
+        pseudo += "export PSEUDO_NOSYMLINKEXP=1;"
+        pseudo += "%s " % get_bitbake_var("FAKEROOTCMD")
+        return pseudo
+
     @classmethod
     def do_prepare_partition(cls, part, source_params, cr, cr_workdir,
                              oe_builddir, bootimg_dir, kernel_dir,
@@ -68,8 +77,14 @@ class RootfsPlugin(SourcePlugin):
                                "it is not a valid path, exiting" % 
part.rootfs_dir)
 
         part.rootfs_dir = cls.__get_rootfs_dir(rootfs_dir)
+        pseudo_dir = os.path.join(part.rootfs_dir, "../pseudo")
+        if not os.path.lexists(pseudo_dir):
+            logger.warn("%s folder does not exist. "
+                        "Usernames and permissions will be invalid " % 
pseudo_dir)
+            pseudo_dir = None
 
         new_rootfs = None
+        new_pseudo = None
         # Handle excluded paths.
         if part.exclude_path or part.include_path:
             # We need a new rootfs directory we can delete files from. Copy to
@@ -78,9 +93,20 @@ class RootfsPlugin(SourcePlugin):
 
             if os.path.lexists(new_rootfs):
                 shutil.rmtree(os.path.join(new_rootfs))
-
             copyhardlinktree(part.rootfs_dir, new_rootfs)
 
+            # Convert the pseudo directory to its new location
+            if (pseudo_dir):
+                new_pseudo = os.path.join(new_rootfs, "../pseudo%d" % 
part.lineno)
+                if os.path.lexists(new_pseudo):
+                    shutil.rmtree(new_pseudo)
+                copytree(pseudo_dir, new_pseudo)
+                pseudo_cmd = "%s -B -m %s -M %s" % 
(cls.__get_pseudo(native_sysroot,
+                                                                     
new_rootfs,
+                                                                     
new_pseudo),
+                                                    part.rootfs_dir, 
new_rootfs)
+                exec_native_cmd(pseudo_cmd, native_sysroot)
+
             for path in part.include_path or []:
                 copyhardlinktree(path, new_rootfs)
 
@@ -112,4 +138,5 @@ class RootfsPlugin(SourcePlugin):
                     shutil.rmtree(full_path)
 
         part.prepare_rootfs(cr_workdir, oe_builddir,
-                            new_rootfs or part.rootfs_dir, native_sysroot)
+                            new_rootfs or part.rootfs_dir, native_sysroot,
+                            pseudo_dir = new_pseudo or pseudo_dir)
-- 
2.25.1

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