It's the order of the atoms in the OBMol's vector of OBAtoms.

On Thu, 4 Feb 2021 at 12:54, Matt Bone <matthew.b...@bristol.ac.uk> wrote:

> Dear OpenBabel,
>
> What determines the atom order in the XYZ files written by
> OpenBabel/Avogadro? It appears there is some logical pattern behind it, but
> I can't figure it out from the files. I've picked through xyzformat.cpp but
> that calls a general molecule class that I haven't been able to understand.
> I'd like to know the logic behind the ordering for some software I'm
> writing, is this order likely to change with newer versions of OpenBabel?
>
> Kind Regards,
>
> Matt
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