Thanks for the hint to use conda. However, maybe alpine-glibc is the
wrong base image? You snuck a /bin/bash in there and when I change that
to /bin/sh or /bin/ash I get a lot of errors upon importing pybel.
>>> import pybel
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/stlformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pngformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pubchem.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/APIInterface.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/MCDLformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gulpformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pwscfformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/MNAformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/acrformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mopacformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/bgfformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/acesformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/boxformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cdxmlformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/reportformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/opendxformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/orcaformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/dlpolyformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/amberformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/inchiformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/crkformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/rsmiformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mdffformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cacheformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/exyzformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/PQSformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/qchemformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fingerprintformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/xmlformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mpqcformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/msmsformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/aoforceformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/crystal09format.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/outformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pointcloudformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/shelxformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/png2format.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gromos96format.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cmlformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mmcifformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chem3dformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mpdformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pdbqtformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/freefracformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gausszmatformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chemkinformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/lmpdatformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/lpmdformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/asciiformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fastaformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/siestaformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/turbomoleformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/xedformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/carformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/smileyformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/viewmolformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/confabreport.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fhformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/povrayformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chemdrawct.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/titleformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gausscubeformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/painterformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chemdrawcdx.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/ghemicalformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cssrformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/abinitformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chemtoolformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gamessukformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/xtcformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/tinkerformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/smilesformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fhiaimsformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/featformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fpsformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/alchemyformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/thermoformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cacaoformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gaussformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/xyzformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pubchemjsonformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pdbformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/vaspformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fastsearchformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/moldenformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/molproformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/castepformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cifformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/daltonformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mol2format.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/groformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/zindoformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mdlformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/gamessformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/yasaraformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pqrformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/hinformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/CSRformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/svgformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/xsfformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/rxnformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/mmodformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cmlreactformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/cccformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/posformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/textformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/msiformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/pcmodelformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/nulformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/unichemformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/adfformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/nwchemformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/chemdoodlejsonformat.so did not load
properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/molreport.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/dmolformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/balstformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/fchkformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/copyformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
==============================
*** Open Babel Error in openLib
/opt/anaconda/lib/openbabel/2.4.1/jaguarformat.so did not load properly.
Error: libXrender.so.1: cannot open shared object file: No such file or
directory
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/opt/anaconda/lib/python3.7/site-packages/pybel.py", line 89, in
<module>
informats = _formatstodict(_obconv.GetSupportedInputFormat())
File "/opt/anaconda/lib/python3.7/site-packages/pybel.py", line 68, in
_formatstodict
broken = [(x, y.strip()) for x, y in broken]
File "/opt/anaconda/lib/python3.7/site-packages/pybel.py", line 68, in
<listcomp>
broken = [(x, y.strip()) for x, y in broken]
ValueError: not enough values to unpack (expected 2, got 1)
On Tue, 2019-04-02 at 19:54 -0500, Dimitri Maziuk via OpenBabel-discuss
wrote:
> On 4/2/19 7:42 PM, Dimitri Maziuk via OpenBabel-discuss wrote:
>
> sorry, too much trimming:
>
>
> FROM frolvlad/alpine-glibc
> RUN echo 'export PATH=/opt/anaconda/bin:$PATH' >
> /etc/profile.d/anaconda.sh && \
> wget --quiet \
> https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh \
> -O ~/anaconda.sh && \
> /bin/bash ~/anaconda.sh -b -p /opt/anaconda && \
> rm ~/anaconda.sh
> ENV PATH /opt/anaconda/bin:$PATH
>
> RUN conda install -y -c openbabel openbabel
>
>
>
>
> _______________________________________________
> OpenBabel-discuss mailing list
> OpenBabel-discuss@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
>
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