Very interesting. I tried it on 2reg. The graphics are well done, and it is
very speedily done. Nice work!
On Thursday, April 23, 2015, Sebastian Salentin <
sebastian.salen...@biotec.tu-dresden.de> wrote:
> Dear all,
>
> we just published the Protein-Ligand Interaction Profiler (PLIP), a web
> service and open source command line tool for characterizing and
> visualizing all relevant non-covalent interactions between proteins and
> ligands in PDB structures.
>
> Web Service: https://projects.biotec.tu-dresden.de/plip-web
> <https://www.researchgate.net/go.Deref.html?url=https%3A%2F%2Fprojects.biotec.tu-dresden.de%2Fplip-web>
> Code:
> *https://github.com/ssalentin/plip <https://github.com/ssalentin/plip>
> *Publication:
>
> *http://nar.oxfordjournals.org/content/early/2015/04/14/nar.gkv315
> <http://nar.oxfordjournals.org/content/early/2015/04/14/nar.gkv315> *
> The code is written in Python and makes use of the Open Babel / Pybel
> library for fast reading of PDB files, internal representation of molecules
> and several chemoinformatic calculations. Thanks to all Open Babel
> contributors for providing this great open source toolbox!
>
> Best
> Sebastian
>
>
>
> --
> Sebastian Salentin, PhD student
> Bioinformatics Group
>
> Technische Universität Dresden
> Biotechnology Center (BIOTEC)
> Tatzberg 47/49
> 01307 Dresden, Germany
>
>
--
--Nathan Pimental,
--Peppertree Labs (http://ptp.x10.mx)
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