I tried using the solution below but am still getting the segmentation fault error. Has anyone else had success with this?
my $x="InChI=1S/C15H12N2O/c16-15(18)17-13-7-3-1-5-11(13)9-10-12-6-2-4-8-14(12)17/h1-10H,(H2,16,18)"; push(@inchis,$x); my $obMol = Chemistry::OpenBabel::OBMol->new(); my $obConversion = Chemistry::OpenBabel::OBConversion->new(); my $genOp = Chemistry::OpenBabel::OBOp::FindType("gen3D"); $obConversion->SetInAndOutFormats("inchi", "sdf"); foreach my $inchi (@inchis) { $obConversion->ReadString($obMol, $inchi); $genOp->Do($obMol); print $obConversion->WriteString($obMol); } -- View this message in context: http://forums.openbabel.org/Generating-3D-SDF-from-InChI-with-Perl-tp4656808p4658256.html Sent from the General discussion mailing list archive at Nabble.com. ------------------------------------------------------------------------------ Dive into the World of Parallel Programming The Go Parallel Website, sponsored by Intel and developed in partnership with Slashdot Media, is your hub for all things parallel software development, from weekly thought leadership blogs to news, videos, case studies, tutorials and more. Take a look and join the conversation now. http://goparallel.sourceforge.net/ _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss