> All I can see in TFM is pybel.Molecule.addh() for "-h" -- is there way
> to get to the rest? Specifically, "-xa" and "-xi", as I can
> post-process the SVG to change the size and the background.
These are output options in the Python openbabel module (not accessible from
pybel, IIRC)
conv = ob.OBConversion()
conv.SetInAndOutFormats("smi", "svg")
conv.AddOption("a",conv.OUTOPTIONS)
conv.AddOption("i",conv.OUTOPTIONS)
conv.AddOption("b",conv.OUTOPTIONS, "none")
etc.
Hope that helps,
-Geoff
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