Hi Steve,
Can you doublecheck that you are compiling with Eigen (see the docs) and
that /usr/local/lib (or whereever the libopenbabel.so was installed) is at
the front of your LD_LIBRARY_PATH.
I have a Linux Mint 12 VM, and can check it out if it still is not
working...
- Noel
On 9 March 2012 17:50, Steven Wathen <swat...@sienaheights.edu> wrote:
> Hello,
>
> I followed the instructions to build openbabel 2.3.1 from source,
> including the python bindings, as given here
>
> http://openbabel.org/docs/current/Installation/install.html
>
> I am running Linux Mint 12.
>
> It looked like it had built properly, but when I try to import pybel I get
> this error:
>
>
> >>> import pybel
> Traceback (most recent call last):
> File "<stdin>", line 1, in <module>
> File "/usr/local/lib/python2.7/dist-packages/pybel.py", line 16, in
> <module>
> import openbabel as ob
> File "/usr/local/lib/python2.7/dist-packages/openbabel.py", line 58, in
> <module>
> _openbabel = swig_import_helper()
> File "/usr/local/lib/python2.7/dist-packages/openbabel.py", line 54, in
> swig_import_helper
> _mod = imp.load_module('_openbabel', fp, pathname, description)
> ImportError: /usr/local/lib/python2.7/dist-packages/_openbabel.so:
> undefined symbol:
> _ZN9OpenBabel5OBMol16SetInternalCoordESt6vectorIPNS_15OBInternalCoordESaIS3_EE
>
>
> Any advice would be appreciated.
>
> Thanks,
>
> Steve
>
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Virtualization & Cloud Management Using Capacity Planning
Cloud computing makes use of virtualization - but cloud computing
also focuses on allowing computing to be delivered as a service.
http://www.accelacomm.com/jaw/sfnl/114/51521223/
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