On 20 October 2010 13:50, Pascal Muller <pascal.jm.mul...@gmail.com> wrote:
>> Did you test the exact command-line I used?
>
> No, because:
> $ ./obabel -:COc1cccc(c1)NS(=O)(=O)/C=C/c1ccccc1 -ocan
> bash: syntax error near unexpected token `('Sorry - I'm on Windows. On Linux you need ./obabel -:"COc1cccc(c1)NS(=O)(=O)/C=C/c1ccccc1" -ocan This syntax allows direct entry of SMILES strings. >> Do you have more than one version of Open Babel installed? If so, try >> removing old versions. > > Yes, I have Open Babel 2.2.3 installed as root in /usr/local/bin/babel > I compiled babel 2.3 with: > > Do you think there could be a conflict? Certainly. Having more than one Open Babel installed is the most common cause of confusing problems. You can overcome these problems by careful setting of environment variables (PATH, LD_LIBRARY_PATH, BABEL_DATADIR, BABEL_LIBDIR). However, it's just easier and simpler to delete the old version. To avoid these problems, I always install Open Babel locally. - Noel ------------------------------------------------------------------------------ Download new Adobe(R) Flash(R) Builder(TM) 4 The new Adobe(R) Flex(R) 4 and Flash(R) Builder(TM) 4 (formerly Flex(R) Builder(TM)) enable the development of rich applications that run across multiple browsers and platforms. Download your free trials today! http://p.sf.net/sfu/adobe-dev2dev _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
