Hi,
I downloaded the source for openbabel-2.2.3. From the main directory, I did
the ./configure; make; sudo make install dance. It looks like it worked (I
just tried converting a few PDB files to SDF). When I go into the
scripts/python directory, here's what happens:
[ler...@mglerner ~/src/openbabel/openbabel-2.2.3/scripts/python]$ python
setup.py build
WARNING: Environment variable OPENBABEL_INSTALL is not set
INFO: Looking for library and include files in ../../src and ../../include
running build
running build_py
copying pybel.py -> build/lib.macosx-10.5-i386-2.6
running build_ext
building '_openbabel' extension
gcc -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -arch i386
-isysroot /Developer/SDKs/MacOSX10.5.sdk
-I/Library/Frameworks/Python.framework/Versions/6.2/include
-I/usr/local/include -I../../include
-I/Library/Frameworks/Python.framework/Versions/6.2/include/python2.6 -c
openbabel_python.cpp -o build/temp.macosx-10.5-i386-2.6/openbabel_python.o
cc1plus: error: unrecognized command line option "-arch"
error: command 'gcc' failed with exit status 1
In case they're relevant:
[ler...@mglerner ~/src/openbabel/openbabel-2.2.3/scripts/python]$ which gcc
/usr/local/bin/gcc
[ler...@mglerner ~/src/openbabel/openbabel-2.2.3/scripts/python]$ gcc
--version
gcc (GCC) 4.4.1 20090623 (prerelease)
Copyright (C) 2009 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
I searched the mailing list, and I don't think this has come up before. My
apologies if it's a repeat. Can someone point me in the right direction?
Thanks,
-Michael
--
Michael Lerner, Ph.D.
IRTA Postdoctoral Fellow
Laboratory of Computational Biology NIH/NHLBI
5635 Fishers Lane, Room T909, MSC 9314
Rockville, MD 20852 (UPS/FedEx/Reality)
Bethesda MD 20892-9314 (USPS)
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