On Mon, Aug 30, 2010 at 9:20 AM, Noel O'Boyle <baoille...@gmail.com> wrote:
> Hi,
>
> It is a (dumb) feature of cmake's FindPython that it choose the
> highest version of Python it can find on your computer, instead of
> using the first one on the path, which leads to these types of
> problems.
>
> If you "grep -i python CMakeCache.txt", you'll see a number of
> variables associated with python, e.g. PYTHON_EXECUTABLE,
> PYTHON_INCLUDE_PATH, PYTHON_LIBRARY. You can set these at the
> command-line with -Dvariable_name=value.
Thanks, that fixed it. But when I try to import openbabel in Python I still get
>>> import openbabel
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Library/Python/2.5/site-packages/openbabel.py", line 14, in <module>
import _openbabel
ImportError: dlopen(/Library/Python/2.5/site-packages/_openbabel.so,
2): Library not loaded: /usr/local/lib/libopenbabel.3.dylib
Referenced from: /Library/Python/2.5/site-packages/_openbabel.so
Reason: image not found
It turns out that I have v4 of the dylibs
gu...@office:~/src/openbabel $ find /usr/local -name "libopenbabel*"
/usr/local/openbabel/lib/libopenbabel.4.0.0.dylib
/usr/local/openbabel/lib/libopenbabel.4.dylib
/usr/local/openbabel/lib/libopenbabel.dylib
generating a symlink to satisfy the error doesn't help - I get a
missing symbol error
Maybe something needs to be updated somewhere?
--
Rajarshi Guha
NIH Chemical Genomics Center
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