Hi Ryan,
I see you're using Intel Compiler 10.1.018. I have compiled OB with
Intel Compiler 11.1.059 without problem (and without BOOST). Do you
have access to a newer compiler, or even to gcc?
- Noel
On 28 April 2010 23:34, Ryan P. Steele <ryan.ste...@yale.edu> wrote:
> Hi, folks -
>
> Having a heck of a time getting openbabel installed. I installed the boost
> libraries and finally got those errors corrected. Now I'm stuck on one that
> doesn't appear obvious (to me, at least). My C compiler (Intel icpc) is
> failing the sanity check during "configure". My config.log is attached.
> Thoughts? I have no problem compiling other programs with this compiler.
>
> Thanks -
> Ryan
>
>
>
>
> This file contains any messages produced by compilers while
> running configure, to aid debugging if configure makes a mistake.
>
> It was created by Open Babel configure 2.2.3, which was
> generated by GNU Autoconf 2.63. Invocation command line was
>
> $ ./configure
>
> ## --------- ##
> ## Platform. ##
> ## --------- ##
>
> hostname = ofer4-laptop
> uname -m = i686
> uname -r = 2.6.24-22-generic
> uname -s = Linux
> uname -v = #1 SMP Mon Nov 24 18:32:42 UTC 2008
>
> /usr/bin/uname -p = unknown
> /bin/uname -X = unknown
>
> /bin/arch = unknown
> /usr/bin/arch -k = unknown
> /usr/convex/getsysinfo = unknown
> /usr/bin/hostinfo = unknown
> /bin/machine = unknown
> /usr/bin/oslevel = unknown
> /bin/universe = unknown
>
> PATH: .
> PATH: /usr
> PATH: /usr/bin
> PATH: /usr/lib/qt4/bin
> PATH: /usr/local
> PATH: /usr/local/bin
> PATH: /bin
> PATH: /home/ofer4
> PATH: /opt/intel
> PATH: /opt/intel/fc/10.1.018
> PATH: /opt/intel/fc/10.1.018/bin
> PATH: /opt/intel/cc/10.1.018/bin
> PATH: /usr/local/texlive/2008/bin/i386-linux
> PATH: /home/ofer4/mybin
> PATH: /usr/local/Trolltech/Qt-4.6.2/bin
> PATH: /usr/local/sbin
> PATH: /usr/local/bin
> PATH: /usr/sbin
> PATH: /usr/bin
> PATH: /sbin
> PATH: /bin
> PATH: /usr/games
> PATH: /home/ofer4/qchem/bin/perl
> PATH: /home/ofer4/qchem/bin
> PATH: /home/ofer4/qchem/gbin
> PATH: /home/ofer4/qchem/exe
> PATH: /home/ofer4/qchem/util
>
>
> ## ----------- ##
> ## Core tests. ##
> ## ----------- ##
>
> configure:2174: checking for a BSD-compatible install
> configure:2242: result: /usr/bin/install -c
> configure:2253: checking whether build environment is sane
> configure:2313: result: yes
> configure:2454: checking for a thread-safe mkdir -p
> configure:2493: result: /bin/mkdir -p
> configure:2506: checking for gawk
> configure:2522: found /usr/bin/gawk
> configure:2533: result: gawk
> configure:2544: checking whether make sets $(MAKE)
> configure:2566: result: yes
> configure:2640: checking whether to enable maintainer-specific portions of
> Makefiles
> configure:2649: result: no
> configure:2662: checking auto silent in maintainer mode
> configure:2674: result: auto-sleep-9
> configure:2729: checking build system type
> configure:2747: result: i686-pc-linux-gnu
> configure:2769: checking host system type
> configure:2784: result: i686-pc-linux-gnu
> configure:2883: checking for style of include used by make
> configure:2911: result: GNU
> configure:3045: checking for C++ compiler version
> configure:3053: /opt/intel/cc/10.1.018/bin/icpc --version >&5
> icpc (ICC) 10.1 20080801
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
>
> configure:3057: $? = 0
> configure:3064: /opt/intel/cc/10.1.018/bin/icpc -v >&5
> Version 10.1
> configure:3068: $? = 0
> configure:3075: /opt/intel/cc/10.1.018/bin/icpc -V >&5
> Intel(R) C++ Compiler for applications running on IA-32, Version 10.1
> Build 20080801 Package ID: l_cc_p_10.1.018
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
> FOR NON-COMMERCIAL USE ONLY
>
> configure:3079: $? = 0
> configure:3102: checking for C++ compiler default output file name
> configure:3124: /opt/intel/cc/10.1.018/bin/icpc conftest.cpp >&5
> configure:3128: $? = 0
> configure:3166: result: a.out
> configure:3185: checking whether the C++ compiler works
> configure:3195: ./a.out
> configure:3199: $? = 0
> configure:3218: result: yes
> configure:3225: checking whether we are cross compiling
> configure:3227: result: no
> configure:3230: checking for suffix of executables
> configure:3237: /opt/intel/cc/10.1.018/bin/icpc -o conftest conftest.cpp
> >&5
> configure:3241: $? = 0
> configure:3267: result:
> configure:3273: checking for suffix of object files
> configure:3299: /opt/intel/cc/10.1.018/bin/icpc -c conftest.cpp >&5
> configure:3303: $? = 0
> configure:3328: result: o
> configure:3332: checking whether we are using the GNU C++ compiler
> configure:3361: /opt/intel/cc/10.1.018/bin/icpc -c conftest.cpp >&5
> configure:3368: $? = 0
> configure:3385: result: yes
> configure:3394: checking whether /opt/intel/cc/10.1.018/bin/icpc accepts -g
> configure:3424: /opt/intel/cc/10.1.018/bin/icpc -c -g conftest.cpp >&5
> configure:3431: $? = 0
> configure:3532: result: yes
> configure:3557: checking dependency style of /opt/intel/cc/10.1.018/bin/icpc
> configure:3667: result: gcc3
> configure:3713: checking for boostlib >= 1.33.1
> configure:3773: /opt/intel/cc/10.1.018/bin/icpc -c -g -O2 -I/usr/include
> conftest.cpp >&5
> configure:3780: $? = 0
> configure:3786: result: yes
> configure:4001: checking for gcc
> configure:4028: result: /opt/intel/cc/10.1.018/bin/icc
> configure:4260: checking for C compiler version
> configure:4268: /opt/intel/cc/10.1.018/bin/icc --version >&5
> icc (ICC) 10.1 20080801
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
>
> configure:4272: $? = 0
> configure:4279: /opt/intel/cc/10.1.018/bin/icc -v >&5
> Version 10.1
> configure:4283: $? = 0
> configure:4290: /opt/intel/cc/10.1.018/bin/icc -V >&5
> Intel(R) C Compiler for applications running on IA-32, Version 10.1 Build
> 20080801 Package ID: l_cc_p_10.1.018
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
> FOR NON-COMMERCIAL USE ONLY
>
> configure:4294: $? = 0
> configure:4297: checking whether we are using the GNU C compiler
> configure:4326: /opt/intel/cc/10.1.018/bin/icc -c conftest.c >&5
> configure:4333: $? = 0
> configure:4350: result: yes
> configure:4359: checking whether /opt/intel/cc/10.1.018/bin/icc accepts -g
> configure:4389: /opt/intel/cc/10.1.018/bin/icc -c -g conftest.c >&5
> configure:4396: $? = 0
> configure:4497: result: yes
> configure:4514: checking for /opt/intel/cc/10.1.018/bin/icc option to accept
> ISO C89
> configure:4588: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5
> configure:4595: $? = 0
> configure:4618: result: none needed
> configure:4638: checking dependency style of /opt/intel/cc/10.1.018/bin/icc
> configure:4748: result: gcc3
> configure:4875: checking for C++ compiler version
> configure:4883: /opt/intel/cc/10.1.018/bin/icpc --version >&5
> icpc (ICC) 10.1 20080801
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
>
> configure:4887: $? = 0
> configure:4894: /opt/intel/cc/10.1.018/bin/icpc -v >&5
> Version 10.1
> configure:4898: $? = 0
> configure:4905: /opt/intel/cc/10.1.018/bin/icpc -V >&5
> Intel(R) C++ Compiler for applications running on IA-32, Version 10.1
> Build 20080801 Package ID: l_cc_p_10.1.018
> Copyright (C) 1985-2008 Intel Corporation. All rights reserved.
> FOR NON-COMMERCIAL USE ONLY
>
> configure:4909: $? = 0
> configure:4912: checking whether we are using the GNU C++ compiler
> configure:4965: result: yes
> configure:4974: checking whether /opt/intel/cc/10.1.018/bin/icpc accepts -g
> configure:5112: result: yes
> configure:5137: checking dependency style of /opt/intel/cc/10.1.018/bin/icpc
> configure:5247: result: gcc3
> configure:5267: checking how to run the C++ preprocessor
> configure:5303: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp
> configure:5310: $? = 0
> configure:5341: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp
> conftest.cpp(11): error #5: could not open source file "ac_nonexistent.h"
> #include <ac_nonexistent.h>
> ^
>
> configure:5348: $? = 2
> configure: failed program was:
> | /* confdefs.h. */
> | #define PACKAGE_NAME "Open Babel"
> | #define PACKAGE_TARNAME "openbabel"
> | #define PACKAGE_VERSION "2.2.3"
> | #define PACKAGE_STRING "Open Babel 2.2.3"
> | #define PACKAGE_BUGREPORT "openbabel-discuss@lists.sourceforge.net"
> | #define BABEL_VERSION "2.2.3"
> | #define BABEL_DATADIR "/usr/local/share/openbabel"
> | #define HAVE_BOOST /**/
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:5381: result: /opt/intel/cc/10.1.018/bin/icpc -E
> configure:5410: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp
> configure:5417: $? = 0
> configure:5448: /opt/intel/cc/10.1.018/bin/icpc -E conftest.cpp
> conftest.cpp(11): error #5: could not open source file "ac_nonexistent.h"
> #include <ac_nonexistent.h>
> ^
>
> configure:5455: $? = 2
> configure: failed program was:
> | /* confdefs.h. */
> | #define PACKAGE_NAME "Open Babel"
> | #define PACKAGE_TARNAME "openbabel"
> | #define PACKAGE_VERSION "2.2.3"
> | #define PACKAGE_STRING "Open Babel 2.2.3"
> | #define PACKAGE_BUGREPORT "openbabel-discuss@lists.sourceforge.net"
> | #define BABEL_VERSION "2.2.3"
> | #define BABEL_DATADIR "/usr/local/share/openbabel"
> | #define HAVE_BOOST /**/
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:5508: checking for a BSD-compatible install
> configure:5576: result: /usr/bin/install -c
> configure:5589: checking for doxygen
> configure:5607: found /usr/bin/doxygen
> configure:5619: result: /usr/bin/doxygen
> configure:5629: checking for swig
> configure:5662: result: no
> configure:5669: checking for perl
> configure:5687: found /usr/bin/perl
> configure:5699: result: /usr/bin/perl
> configure:5709: checking for prove
> configure:5727: found /usr/bin/prove
> configure:5739: result: /usr/bin/prove
> configure:5749: checking for python
> configure:5767: found /usr/bin/python
> configure:5779: result: /usr/bin/python
> configure:5789: checking for ruby
> configure:5807: found /usr/bin/ruby
> configure:5819: result: /usr/bin/ruby
> configure:5831: checking for gmcs
> configure:5864: result: no
> configure:5875: checking for javac
> configure:5908: result: no
> configure:5915: checking for jar
> configure:5948: result: no
> configure:5958: checking for wx-config
> configure:5976: found /usr/local/bin/wx-config
> configure:5988: result: /usr/local/bin/wx-config
> configure:6443: checking for a sed that does not truncate output
> configure:6509: result: /bin/sed
> configure:6527: checking for grep that handles long lines and -e
> configure:6587: result: /bin/grep
> configure:6592: checking for egrep
> configure:6656: result: /bin/grep -E
> configure:6661: checking for fgrep
> configure:6725: result: /bin/grep -F
> configure:6760: checking for ld used by /opt/intel/cc/10.1.018/bin/icc
> configure:6827: result: /usr/bin/ld
> configure:6836: checking if the linker (/usr/bin/ld) is GNU ld
> configure:6851: result: yes
> configure:6863: checking for BSD- or MS-compatible name lister (nm)
> configure:6912: result: /usr/bin/nm -B
> configure:7030: checking the name lister (/usr/bin/nm -B) interface
> configure:7037: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5
> configure:7040: /usr/bin/nm -B "conftest.o"
> configure:7043: output
> 00000000 N .debug_info_seg
> 00000000 B some_variable
> configure:7050: result: BSD nm
> configure:7053: checking whether ln -s works
> configure:7057: result: yes
> configure:7065: checking the maximum length of command line arguments
> configure:7185: result: 98304
> configure:7202: checking whether the shell understands some XSI constructs
> configure:7212: result: yes
> configure:7216: checking whether the shell understands "+="
> configure:7222: result: yes
> configure:7257: checking for /usr/bin/ld option to reload object files
> configure:7264: result: -r
> configure:7333: checking for objdump
> configure:7360: result: objdump
> configure:7389: checking how to recognize dependent libraries
> configure:7585: result: pass_all
> configure:7645: checking for ar
> configure:7661: found /usr/bin/ar
> configure:7672: result: ar
> configure:7750: checking for strip
> configure:7766: found /usr/bin/strip
> configure:7777: result: strip
> configure:7849: checking for ranlib
> configure:7865: found /usr/bin/ranlib
> configure:7876: result: ranlib
> configure:7966: checking command to parse /usr/bin/nm -B output from
> /opt/intel/cc/10.1.018/bin/icc object
> configure:8084: /opt/intel/cc/10.1.018/bin/icc -c -g -O2 conftest.c >&5
> configure:8087: $? = 0
> configure:8091: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[
> ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
> ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
> configure:8094: $? = 0
> configure:8148: /opt/intel/cc/10.1.018/bin/icc -o conftest -g -O2
> conftest.c conftstm.o >&5
> configure:8151: $? = 0
> configure:8189: result: ok
> configure:9056: checking how to run the C preprocessor
> configure:9174: result: /opt/intel/cc/10.1.018/bin/icpc
> configure:9203: /opt/intel/cc/10.1.018/bin/icpc conftest.c
> conftest.c(16): error: identifier "Syntax" is undefined
> Syntax error
> ^
>
> conftest.c(16): error: expected a ";"
>
> compilation aborted for conftest.c (code 2)
> configure:9210: $? = 2
> configure: failed program was:
> | /* confdefs.h. */
> | #define PACKAGE_NAME "Open Babel"
> | #define PACKAGE_TARNAME "openbabel"
> | #define PACKAGE_VERSION "2.2.3"
> | #define PACKAGE_STRING "Open Babel 2.2.3"
> | #define PACKAGE_BUGREPORT "openbabel-discuss@lists.sourceforge.net"
> | #define BABEL_VERSION "2.2.3"
> | #define BABEL_DATADIR "/usr/local/share/openbabel"
> | #define HAVE_BOOST /**/
> | /* end confdefs.h. */
> | #ifdef __STDC__
> | # include <limits.h>
> | #else
> | # include <assert.h>
> | #endif
> | Syntax error
> configure:9203: /opt/intel/cc/10.1.018/bin/icpc conftest.c
> conftest.c(16): error: identifier "Syntax" is undefined
> Syntax error
> ^
>
> conftest.c(16): error: expected a ";"
>
> compilation aborted for conftest.c (code 2)
> configure:9210: $? = 2
> configure: failed program was:
> | /* confdefs.h. */
> | #define PACKAGE_NAME "Open Babel"
> | #define PACKAGE_TARNAME "openbabel"
> | #define PACKAGE_VERSION "2.2.3"
> | #define PACKAGE_STRING "Open Babel 2.2.3"
> | #define PACKAGE_BUGREPORT "openbabel-discuss@lists.sourceforge.net"
> | #define BABEL_VERSION "2.2.3"
> | #define BABEL_DATADIR "/usr/local/share/openbabel"
> | #define HAVE_BOOST /**/
> | /* end confdefs.h. */
> | #ifdef __STDC__
> | # include <limits.h>
> | #else
> | # include <assert.h>
> | #endif
> | Syntax error
> configure:9272: error: in `/home/ofer4/Downloads/openbabel-2.2.3':
> configure:9275: error: C preprocessor "/opt/intel/cc/10.1.018/bin/icpc"
> fails sanity check
> See `config.log' for more details.
>
> ## ---------------- ##
> ## Cache variables. ##
> ## ---------------- ##
>
> ac_cv_build=i686-pc-linux-gnu
> ac_cv_c_compiler_gnu=yes
> ac_cv_cxx_compiler_gnu=yes
> ac_cv_env_CCC_set=
> ac_cv_env_CCC_value=
> ac_cv_env_CC_set=set
> ac_cv_env_CC_value=/opt/intel/cc/10.1.018/bin/icc
> ac_cv_env_CFLAGS_set=
> ac_cv_env_CFLAGS_value=
> ac_cv_env_CPPFLAGS_set=
> ac_cv_env_CPPFLAGS_value=
> ac_cv_env_CPP_set=set
> ac_cv_env_CPP_value=/opt/intel/cc/10.1.018/bin/icpc
> ac_cv_env_CXXCPP_set=
> ac_cv_env_CXXCPP_value=
> ac_cv_env_CXXFLAGS_set=
> ac_cv_env_CXXFLAGS_value=
> ac_cv_env_CXX_set=set
> ac_cv_env_CXX_value=/opt/intel/cc/10.1.018/bin/icpc
> ac_cv_env_LDFLAGS_set=
> ac_cv_env_LDFLAGS_value=
> ac_cv_env_LIBS_set=
> ac_cv_env_LIBS_value=
> ac_cv_env_WXCONFIG_set=
> ac_cv_env_WXCONFIG_value=
> ac_cv_env_build_alias_set=
> ac_cv_env_build_alias_value=
> ac_cv_env_host_alias_set=
> ac_cv_env_host_alias_value=
> ac_cv_env_target_alias_set=
> ac_cv_env_target_alias_value=
> ac_cv_host=i686-pc-linux-gnu
> ac_cv_objext=o
> ac_cv_path_DOXYGEN=/usr/bin/doxygen
> ac_cv_path_EGREP='/bin/grep -E'
> ac_cv_path_FGREP='/bin/grep -F'
> ac_cv_path_GREP=/bin/grep
> ac_cv_path_PERL=/usr/bin/perl
> ac_cv_path_PROVE=/usr/bin/prove
> ac_cv_path_PYTHON=/usr/bin/python
> ac_cv_path_RUBY=/usr/bin/ruby
> ac_cv_path_SED=/bin/sed
> ac_cv_path_WXCONFIG=/usr/local/bin/wx-config
> ac_cv_path_install='/usr/bin/install -c'
> ac_cv_path_mkdir=/bin/mkdir
> ac_cv_prog_AWK=gawk
> ac_cv_prog_CPP=/opt/intel/cc/10.1.018/bin/icpc
> ac_cv_prog_CXXCPP='/opt/intel/cc/10.1.018/bin/icpc -E'
> ac_cv_prog_ac_ct_AR=ar
> ac_cv_prog_ac_ct_CC=/opt/intel/cc/10.1.018/bin/icc
> ac_cv_prog_ac_ct_OBJDUMP=objdump
> ac_cv_prog_ac_ct_RANLIB=ranlib
> ac_cv_prog_ac_ct_STRIP=strip
> ac_cv_prog_cc_c89=
> ac_cv_prog_cc_g=yes
> ac_cv_prog_cxx_g=yes
> ac_cv_prog_make_make_set=yes
> am_cv_CC_dependencies_compiler_type=gcc3
> am_cv_CXX_dependencies_compiler_type=gcc3
> lt_cv_deplibs_check_method=pass_all
> lt_cv_file_magic_cmd='$MAGIC_CMD'
> lt_cv_file_magic_test_file=
> lt_cv_ld_reload_flag=-r
> lt_cv_nm_interface='BSD nm'
> lt_cv_path_LD=/usr/bin/ld
> lt_cv_path_NM='/usr/bin/nm -B'
> lt_cv_prog_gnu_ld=yes
> lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
> ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
> ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'''
> lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/
> {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/
> {"\2", (void *) \&\2},/p'\'''
> lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^:
> \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\)
> \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^
> ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
> lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int
> \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
> lt_cv_sys_max_cmd_len=98304
>
> ## ----------------- ##
> ## Output variables. ##
> ## ----------------- ##
>
> ACLOCAL='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run
> aclocal-1.11'
> AMDEPBACKSLASH='\'
> AMDEP_FALSE='#'
> AMDEP_TRUE=''
> AMTAR='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run tar'
> AR='ar'
> AS='as'
> AUTOCONF='sleep 9 ; true || autoconf || skipped'
> AUTOHEADER='sleep 9 ; true || autoheader || skipped'
> AUTOMAKE='sleep 9 ; true || automake || skipped'
> AWK='gawk'
> BIN2HEX_FALSE='#'
> BIN2HEX_TRUE=''
> BOOST_CPPFLAGS='-I/usr/include'
> BOOST_LDFLAGS='-L/usr/lib'
> BUILD_CSHARP_FALSE='#'
> BUILD_CSHARP_TRUE=''
> BUILD_DOCS_FALSE='#'
> BUILD_DOCS_TRUE=''
> BUILD_INCHI_FALSE=''
> BUILD_INCHI_TRUE=''
> BUILD_JAVA_FALSE=''
> BUILD_JAVA_TRUE='#'
> BUILD_PCH_FALSE=''
> BUILD_PCH_TRUE=''
> BUILD_RUBY_FALSE='#'
> BUILD_RUBY_TRUE=''
> BUILD_SCRIPTS_FALSE='#'
> BUILD_SCRIPTS_TRUE=''
> BUILD_SHARED_FALSE=''
> BUILD_SHARED_TRUE=''
> BUILD_SHARED_UNIX_FALSE=''
> BUILD_SHARED_UNIX_TRUE=''
> BUILD_SHARED_WIN_FALSE=''
> BUILD_SHARED_WIN_TRUE=''
> BUILD_SWIG_FALSE=''
> BUILD_SWIG_TRUE='#'
> BUILD_WXGUI_FALSE=''
> BUILD_WXGUI_TRUE='#'
> BUILD_XML_FALSE=''
> BUILD_XML_TRUE=''
> BUILD_ZLIB_FALSE=''
> BUILD_ZLIB_TRUE=''
> CC='/opt/intel/cc/10.1.018/bin/icc'
> CCDEPMODE='depmode=gcc3'
> CFLAGS='-g -O2'
> CPP='/opt/intel/cc/10.1.018/bin/icpc'
> CPPFLAGS=''
> CSHARP='mcs'
> CXX='/opt/intel/cc/10.1.018/bin/icpc'
> CXXCPP='/opt/intel/cc/10.1.018/bin/icpc -E'
> CXXDEPMODE='depmode=gcc3'
> CXXFLAGS='-g -O2'
> CYGPATH_W='echo'
> DEFS=''
> DEPDIR='.deps'
> DLLTOOL='dlltool'
> DOXYGEN='/usr/bin/doxygen'
> DSYMUTIL=''
> DUMPBIN=''
> ECHO_C=''
> ECHO_N='-n'
> ECHO_T=''
> EGREP='/bin/grep -E'
> EXEEXT=''
> FGREP='/bin/grep -F'
> GREP='/bin/grep'
> HAVE_REGEX_FALSE=''
> HAVE_REGEX_TRUE=''
> HAVE_SHARED_POINTER_FALSE=''
> HAVE_SHARED_POINTER_TRUE=''
> INSTALL_DATA='${INSTALL} -m 644'
> INSTALL_PROGRAM='${INSTALL}'
> INSTALL_SCRIPT='${INSTALL}'
> INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
> JAR=''
> JAVAC=''
> LD='/usr/bin/ld'
> LDFLAGS=''
> LIBDL=''
> LIBOBJS=''
> LIBS=''
> LIBTOOL=''
> LIPO=''
> LN_S='ln -s'
> LTLIBOBJS=''
> MAINT='#'
> MAINTAINER_MODE_FALSE=''
> MAINTAINER_MODE_TRUE='#'
> MAKEINFO='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/missing --run
> makeinfo'
> MKDIR_P='/bin/mkdir -p'
> NM='/usr/bin/nm -B'
> NMEDIT=''
> OBJDUMP='objdump'
> OBJEXT='o'
> OTOOL64=''
> OTOOL=''
> PACKAGE='openbabel'
> PACKAGE_BUGREPORT='openbabel-discuss@lists.sourceforge.net'
> PACKAGE_NAME='Open Babel'
> PACKAGE_STRING='Open Babel 2.2.3'
> PACKAGE_TARNAME='openbabel'
> PACKAGE_VERSION='2.2.3'
> PATH_SEPARATOR=':'
> PERL='/usr/bin/perl'
> PERL_TESTS_FALSE='#'
> PERL_TESTS_TRUE=''
> PROVE='/usr/bin/prove'
> PYTHON='/usr/bin/python'
> RANLIB='ranlib'
> RUBY='/usr/bin/ruby'
> SED='/bin/sed'
> SET_MAKE=''
> SHELL='/bin/bash'
> STRIP='strip'
> SWIG=''
> USE_BOOST_FLAGS_FALSE=''
> USE_BOOST_FLAGS_TRUE=''
> VERSION='2.2.3'
> WXCONFIG='/usr/local/bin/wx-config'
> WX_CPPFLAGS=''
> WX_CXXFLAGS=''
> WX_LIBS=''
> XML2_CONFIG=''
> XML_CPPFLAGS=''
> XML_LIBS=''
> ac_ct_CC='/opt/intel/cc/10.1.018/bin/icc'
> ac_ct_CXX=''
> ac_ct_DUMPBIN=''
> am__EXEEXT_FALSE=''
> am__EXEEXT_TRUE=''
> am__fastdepCC_FALSE='#'
> am__fastdepCC_TRUE=''
> am__fastdepCXX_FALSE='#'
> am__fastdepCXX_TRUE=''
> am__include='include'
> am__isrc=''
> am__leading_dot='.'
> am__quote=''
> am__tar='${AMTAR} chof - "$$tardir"'
> am__untar='${AMTAR} xf -'
> bindir='${exec_prefix}/bin'
> build='i686-pc-linux-gnu'
> build_alias=''
> build_cpu='i686'
> build_os='linux-gnu'
> build_vendor='pc'
> datadir='${datarootdir}'
> datarootdir='${prefix}/share'
> docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
> dvidir='${docdir}'
> exec_prefix='${prefix}'
> host='i686-pc-linux-gnu'
> host_alias=''
> host_cpu='i686'
> host_os='linux-gnu'
> host_vendor='pc'
> htmldir='${docdir}'
> includedir='${prefix}/include'
> infodir='${datarootdir}/info'
> install_sh='${SHELL} /home/ofer4/Downloads/openbabel-2.2.3/install-sh'
> libdir='${exec_prefix}/lib'
> libexecdir='${exec_prefix}/libexec'
> localedir='${datarootdir}/locale'
> localstatedir='${prefix}/var'
> lt_ECHO='echo'
> mandir='${datarootdir}/man'
> mkdir_p='/bin/mkdir -p'
> oldincludedir='/usr/include'
> pdfdir='${docdir}'
> pkglibdir=''
> prefix='/usr/local'
> program_transform_name='s,x,x,'
> psdir='${docdir}'
> sbindir='${exec_prefix}/sbin'
> sharedstatedir='${prefix}/com'
> sysconfdir='${prefix}/etc'
> target_alias=''
>
> ## ----------- ##
> ## confdefs.h. ##
> ## ----------- ##
>
> #define PACKAGE_NAME "Open Babel"
> #define PACKAGE_TARNAME "openbabel"
> #define PACKAGE_VERSION "2.2.3"
> #define PACKAGE_STRING "Open Babel 2.2.3"
> #define PACKAGE_BUGREPORT "openbabel-discuss@lists.sourceforge.net"
> #define BABEL_VERSION "2.2.3"
> #define BABEL_DATADIR "/usr/local/share/openbabel"
> #define HAVE_BOOST /**/
>
> configure: exit 1
>
> ------------------------------------------------------------------------------
>
> _______________________________________________
> OpenBabel-discuss mailing list
> OpenBabel-discuss@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
>
>
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