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https://issues.apache.org/jira/browse/CTAKES-519?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16800683#comment-16800683
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Sean Finan commented on CTAKES-519:
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Hi Ahmad,
If you want temporal, coreference and relations, I suggest that you use the
DefaultAdvancedPipeline.piper or SectionedAdvancedPipeline.piper , both of
which are in ctakes-coreference-res. The difference between them is that
Sectioned* attempts to provide section, paragraph and list information.
There are a lot of ways to get output out of ctakes. Some writers (often
referred to as "cas consumers") create files while others write to databases,
standard output or a log. You can put one or more "add" commands in the piper
file to do this, just specify a writer like you would an annotation engine.
A good number of the ctakes projects have class consumers in a source package
named "cc", the most populated being ctakes-core. If you want to quickly look
at output on a file-by-file basis then I suggest that you put "add
html.HtmlTextWriter" at the end of the piper. There might be something in
ctakes that writes all extracted information in a tabular format, but I don't
know of one. People frequently create custom classes that write output to
whatever specifications they need.
Sean
> Polarity not working with Piper files
> -------------------------------------
>
> Key: CTAKES-519
> URL: https://issues.apache.org/jira/browse/CTAKES-519
> Project: cTAKES
> Issue Type: Bug
> Components: ctakes-context-tokenizer
> Affects Versions: 4.0.0
> Environment: Windows 10
> Reporter: Michael Judd
> Priority: Major
> Labels: newbie
> Original Estimate: 0.1h
> Remaining Estimate: 0.1h
>
> This isn't a bug report but wasn't sure what's the best method of contact.
> I'm trying to get negation working in cTAKES and haven't had much luck. I
> tried the default clinical pipeline and also added the ContextAnnotator and
> they both end up with all polarity="0"
>
> My current piper is just a modification of the default clinical with an added
> add ContextAnnotator (and one commented out, I'm on the wrong computer so I
> can't screenshot).
>
> I'm probably just using the wrong piper files as a user error, so if you'd be
> able to show me a correct piper with polarity enabled + CUI tagging, I'd
> really appreciate it!
>
>
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