See <https://builds.apache.org/job/ctakes-trunk-compiletest/337/changes>
Changes: [tmill] Added field for regex name and getter. ------------------------------------------ [...truncated 5990 lines...] T E S T S ------------------------------------------------------- [INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-temporal-res --- Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES Temporal Information Extraction 3.1.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/target> [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-temporal --- [INFO] Configured Artifact: net.sourceforge.ctakesresources:ctakes-resources-umls2011ab:3.1.0:jar [INFO] [INFO] Unpacking /home/jenkins/jenkins-slave/maven-repositories/1/net/sourceforge/ctakesresources/ctakes-resources-umls2011ab/3.1.0/ctakes-resources-umls2011ab-3.1.0.jar to <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/target/unpacked> with includes "" and excludes "" [INFO] --- maven-dependency-plugin:2.6:unpack (unpack) @ ctakes-temporal --- [INFO] [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-temporal --- Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-temporal --- [INFO] Copying 2 resources [INFO] Copying 3 resources [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-temporal --- [INFO] Compiling 71 source files to <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/target/classes> [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/Evaluation_ImplBase.java>:[265,19] [deprecation] locateFile(java.lang.String) in org.apache.ctakes.core.resource.FileLocator has been deprecated [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/pipelines/EventAndTimeExtractionPipeline.java>:[157,19] [deprecation] locateFile(java.lang.String) in org.apache.ctakes.core.resource.FileLocator has been deprecated [WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/pipelines/EventExtractionPipeline.java>:[150,19] [deprecation] locateFile(java.lang.String) in org.apache.ctakes.core.resource.FileLocator has been deprecated [INFO] Configured Artifact: net.sourceforge.ctakesresources:ctakes-resources-umls2011ab:3.1.0:jar [INFO] [INFO] ctakes-resources-umls2011ab-3.1.0.jar already unpacked. [INFO] --- maven-dependency-plugin:2.6:unpack (unpack) @ ctakes-temporal --- [INFO] Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-temporal --- [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 2 resources [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-temporal --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-temporal --- [debug] execute contextualize [INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/src/test/resources> [INFO] Copying 3 resources [INFO] Copying 3 resources [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-temporal --- [INFO] [INFO] No sources to compile [INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-temporal --- [INFO] [INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-temporal/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- [INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-temporal --- Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/target> [INFO] ------------------------------------------------------------------------ [INFO] Building Apache cTAKES ctakes-clinical-pipeline 3.1.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-clinical-pipeline --- [INFO] [INFO] --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-clinical-pipeline --- Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom [debug] execute contextualize [INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/src/main/resources> [INFO] Copying 3 resources [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-clinical-pipeline --- [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-clinical-pipeline --- [INFO] Compiling 4 source files to <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/runtime/BagOfAnnotationsGenerator.java>:[74,55] [unchecked] unchecked cast found : java.lang.reflect.Type required: java.lang.Class<T> [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ae/ExtractionPrepAnnotator.java>:[167,17] [unchecked] unchecked call to add(E) as a member of the raw type java.util.Set [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ClinicalPipelineWithUmls.java>:[56,94] cannot find symbol symbol : variable CORPUS_WO_GOLD_STD_TO_RUN_THROUGH_CTAKES location: class org.apache.ctakes.assertion.util.AssertionConst [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-clinical-pipeline/src/main/java/org/apache/ctakes/clinicalpipeline/ClinicalPipelineWithUmls.java>:[58,64] cannot find symbol symbol : variable CORPUS_WO_GOLD_STD_TO_RUN_THROUGH_CTAKES location: class org.apache.ctakes.assertion.util.AssertionConst [INFO] 4 errors [INFO] ------------------------------------------------------------- [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Apache cTAKES ..................................... SUCCESS [28.546s] [INFO] Apache cTAKES common type system .................. SUCCESS [11.650s] [INFO] Apache cTAKES utils ............................... SUCCESS [3.234s] [INFO] Apache cTAKES Resources core ...................... SUCCESS [1.437s] [INFO] Apache cTAKES core ................................ SUCCESS [18.460s] [INFO] Apache cTAKES Resources pos-tagger ................ SUCCESS [2.312s] [INFO] Apache cTAKES part-of-speech tagger ............... SUCCESS [7.255s] [INFO] Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [3.463s] [INFO] Apache cTAKES chunker ............................. SUCCESS [4.666s] [INFO] Apache cTAKES document preprocessor ............... SUCCESS [2.824s] [INFO] Apache cTAKES Resources dictionary-lookup ......... SUCCESS [1.349s] [INFO] Apache cTAKES dictionary lookup ................... SUCCESS [26.893s] [INFO] Apache cTAKES context dependent tokenizer ......... SUCCESS [2.184s] [INFO] Apache cTAKES Resources lvg ....................... SUCCESS [1.968s] [INFO] Apache cTAKES LVG lexical tools ................... SUCCESS [3.933s] [INFO] Apache cTAKES Resources ne-contexts ............... SUCCESS [1.847s] [INFO] Apache cTAKES named entity contexts ............... SUCCESS [3.658s] [INFO] Apache cTAKES Resources constituency-parser ....... SUCCESS [5.404s] [INFO] Apache cTAKES Constituency Parser ................. SUCCESS [2.438s] [INFO] Apache cTAKES Resources coreference ............... SUCCESS [3.198s] [INFO] Apache cTAKES Resources relation-extractor ........ SUCCESS [1.550s] [INFO] Apache cTAKES Resources dependency-parser ......... SUCCESS [15.866s] [INFO] Apache cTAKES Dependency Parser ................... SUCCESS [41.526s] [INFO] Apache cTAKES Relation Extractor .................. SUCCESS [10.773s] [INFO] Apache cTAKES CoReference Resolver ................ SUCCESS [5.233s] [INFO] Apache cTAKES Resources drug-ner .................. SUCCESS [2.059s] [INFO] Apache cTAKES Drug NER ............................ SUCCESS [5.513s] [INFO] Apache cTAKES Resources side-effect ............... SUCCESS [2.180s] [INFO] Apache cTAKES Side Effects ........................ SUCCESS [6.017s] [INFO] Apache cTAKES Resources smoking-status ............ SUCCESS [2.131s] [INFO] Apache cTAKES Smoking Status ...................... SUCCESS [5.678s] [INFO] Apache cTAKES Resources pad-term-spotter-res ...... SUCCESS [1.819s] [INFO] Apache cTAKES Pad Term Spotter .................... SUCCESS [6.998s] [INFO] Apache cTAKES Resources assertion ................. SUCCESS [2.756s] [INFO] Apache cTAKES Resources assertion-zoner ........... SUCCESS [1.314s] [INFO] Apache cTAKES Assertion's zoner ................... SUCCESS [4.886s] [INFO] Apache cTAKES Assertion ........................... SUCCESS [5.969s] [INFO] Apache cTAKES Resources temporal .................. SUCCESS [1.233s] [INFO] Apache cTAKES Temporal Information Extraction ..... SUCCESS [22.837s] [INFO] Apache cTAKES ctakes-clinical-pipeline ............ FAILURE [5.192s] [INFO] Apache cTAKES Distribution ........................ SKIPPED [INFO] Apache cTAKES Regression-test ..................... SKIPPED [INFO] Apache cTAKES template filler ..................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 5:00.067s [INFO] Finished at: Thu Jul 11 19:16:02 UTC 2013 [INFO] Final Memory: 39M/220M [INFO] ------------------------------------------------------------------------ [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled Waiting for Jenkins to finish collecting data mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-clinical-pipeline: Compilation failure cause : Compilation failure Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-clinical-pipeline: Compilation failure at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:320) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:100) at hudson.maven.Maven3Builder.call(Maven3Builder.java:66) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:326) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918) at java.lang.Thread.run(Thread.java:662) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:678) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] Sending e-mails to: [email protected] channel stopped
