Dear colleagues,

We are pleased to share with you our latest publication on the use of eDNA
as a complementary tool to investigate cetacean distribution and feeding
ecology.

*Title:* Environmental DNA as a complementary tool for biodiversity
monitoring: A multi-technique and multi-trophic approach to investigate
cetacean distribution and feeding ecology

*Authors:* Luís Afonso, Joana Costa, Ana Mafalda Correia, Raul Valente, Eva
Lopes, Maria Paola Tomasino, Ágatha Gil, Cláudia Oliveira-Rodrigues, Isabel
Sousa-Pinto, Alfredo López, Paula Suarez-Bregua, Catarina Magalhães

*Abstract: *The use of environmental DNA (eDNA) to assess the presence of
biological communities has emerged as a promising monitoring tool in the
marine conservation landscape. Moreover, advances in Next-Generation
Sequencing techniques, such as DNA metabarcoding, enable multi-species
detection in mixed samples, allowing the study of complex ecosystems such
as oceanic ones. We aimed at using these molecular-based techniques to
characterize cetacean communities, as well as potential prey on the
northern coast of Mainland Portugal. During four seasonal campaigns (summer
2021 to winter 2022/2023), seawater samples were collected along with
visual records of cetacean occurrence. The eDNA isolated from 64
environmental samples was sequenced in an Illumina platform, with universal
primers targeting marine vertebrates. Five cetacean species were identified
by molecular detection: common dolphin (*Delphinus delphis*), bottlenose
dolphin (Tursiops truncatus), Risso’s dolphin (*Grampus griseus*), harbor
porpoise (*Phocoena phocoena*) and fin whale (*Balaenoptera physalus*).
Overall, except for the latter (not sighted during the campaigns), this
cetacean community composition was similar to that obtained through visual
monitoring, and the complementary results suggest their presence in the
region all year round. In addition, the positive molecular detections
of *Balaenoptera
physalus* are of special relevance since there are no records of this
species reported on scientific bibliography in the area. The detection of
multiple known prey of the identified dolphins indicates an overlap between
predator and prey in the study area, which suggests that these animals may
use this coastal area for feeding purposes. While this methodological
approach remains in a development stage, the present work highlights the
benefits of using eDNA to study marine communities, with specific
applications for research on cetacean distribution and feeding ecology.

*Link: *
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0300992

Please feel free to reach out if you want to discuss our work.
Thank you,
Luís Afonso et al.


-- 
*Luís Afonso*

Coastal Biodiversity and Microbiome Ecology and Biogeochemistry


*CIIMAR | Interdisciplinary Centre of Marine and Environmental Research*

*of the University of Porto*

Terminal de Cruzeiros do Porto de Leixões

Avenida General Norton de Matos, S/N

4450-208 Matosinhos | Portugal

E-mail: lafonso*@ciimar.up.pt <http://ciimar.up.pt/>*

<http://www.facebook.com/ciimar.up.pt>

* <crodrig...@ciimar.up.pt>*
* <crodrig...@ciimar.up.pt>*
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