Hello MARMAM people,

My co-authors and I would like to share with you our recent publication
about a software tool we developed to aid in processing survey data, as
well as analyze North Atlantic right whale detections (both visual and
acoustic) for dynamic management:


Crowe LM, Cole TVN, Foley HJ, Cholewiak DM (2023). Shiny tools for
management rules: interactive applications that aid in conservation
strategies for North Atlantic right whales. Journal of Open Source
Software, 8(88), 5436, https://doi.org/10.21105/joss.05436

Summary: Conservation strategies aimed at protecting the Critically
Endangered North Atlantic right whale in the United States currently
include static and dynamic management measures to mitigate vessel strikes.
The vessel speed restriction ruling was first put into place in late 2008,
but beginning around 2010, a range-wide distribution shift occurred for the
species, and right whales were increasingly sighted in regions without
existing static protections. This change in habitat use put pressure on
dynamic measures to provide some level of protection in these areas outside
of Seasonal Management Areas (SMAs). The shift in right whale habitat use
motivated the integration of additional ways to detect the presence of
right whales, and in late 2020, a program was introduced that expanded
dynamic management by triggering Slow Zones in response to acoustic
detections of right whale vocalizations.

The expansion of the dynamic management conservation strategy, as well as
the increase in detection of right whales outside of SMAs, called for tools
to: 1) streamline the process of handling multiple streams of right whale
detection data, 2) refine and modernize the process of determining if the
trigger criteria for dynamic measures were met, 3) quickly and accurately
calculate the boundaries of a proposed Slow Zone, and 4) communicate this
information to federal managers in near real-time.

The tools described here were developed for scientists at the Northeast
Fisheries Science Center in their role as data stewards to support federal
managers at the Greater Atlantic Regional Fisheries Office; however, the
data processing and reporting procedure will be of interest to wildlife
survey and management teams with similar objectives. Additionally, these
publicly available tools provide transparency and reproducibility of the
process for declaring dynamic protection zones in the Northeast United
States. These tools were written primarily using the R coding language and
specifically leverage the ‘Shiny’ package.


The paper is available at the link above through the Journal of Open Source
Software, which provides a link to our GitHub repository.

Please do not hesitate to contact me with any questions!

Leah

-- 
Leah M. Crowe (she/her)
Protected Species Branch
Northeast Fisheries Science Center
166 Water Street
Woods Hole, MA 02543
www.nefsc.noaa.gov/psb/
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