When I tried to install py311-scipy on an M1 MacBook Pro running the latest macOS (Sonoma 14.0), installation failed with (among others) the following error message:
:debug:main Starting logging for py311-scipy @1.10.1_0+gfortran+openblas :debug:sysinfo macOS 14.0 (darwin/23.0.0) arch arm :debug:sysinfo MacPorts 2.8.1 :debug:sysinfo Xcode 15.0, CLT 15.0.0.0.1.1694021235 :debug:sysinfo SDK 14 :debug:sysinfo MACOSX_DEPLOYMENT_TARGET: 14.0 … :info:build INFO: libraries armpl_lp64_mp not found in ['/opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib', '/usr/lib', '/opt/local/lib'] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: lapack_mkl_info: :info:build INFO: Disabled lapack_mkl_info: (MKLROOT is None) :info:build INFO: Disabled lapack_mkl_info: (MKLROOT is None) :info:build INFO: libraries mkl_rt not found in [] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: lapack_ssl2_info: :info:build INFO: libraries fjlapackexsve not found in ['/opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib', '/usr/lib', '/opt/local/lib'] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: openblas_lapack_info: … :info:build ld: duplicate LC_RPATH '/opt/local/lib/libgcc' in '/opt/local/lib/libopenblas-r1.dylib' :info:build clang: error: linker command failed with exit code 1 (use -v to see invocation) :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: openblas_clapack_info: :info:build INFO: libraries openblas,lapack not found in ['/opt/local/lib', '/opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib', '/usr/lib'] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: flame_info: :info:build INFO: libraries flame not found in ['/opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib', '/usr/lib', '/opt/local/lib'] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: accelerate_info: :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: atlas_3_10_threads_info: :info:build INFO: Setting PTATLAS=ATLAS :info:build INFO: Disabled atlas_3_10_threads_info: (ATLAS is None) :info:build INFO: <class 'numpy.distutils.system_info.atlas_3_10_threads_info'> :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: atlas_3_10_info: :info:build INFO: Disabled atlas_3_10_info: (ATLAS is None) :info:build INFO: <class 'numpy.distutils.system_info.atlas_3_10_info'> :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: atlas_threads_info: :info:build INFO: Setting PTATLAS=ATLAS :info:build INFO: Disabled atlas_threads_info: (ATLAS is None) :info:build INFO: <class 'numpy.distutils.system_info.atlas_threads_info'> :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: atlas_info: :info:build INFO: Disabled atlas_info: (ATLAS is None) :info:build INFO: <class 'numpy.distutils.system_info.atlas_info'> :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build INFO: lapack_info: :info:build INFO: libraries lapack not found in ['/opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib', '/usr/lib', '/opt/local/lib'] :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build /opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/distutils/system_info.py:1972: UserWarning: :info:build Lapack (http://www.netlib.org/lapack/) libraries not found. :info:build Directories to search for the libraries can be specified in the :info:build numpy/distutils/site.cfg file (section [lapack]) or by setting :info:build the LAPACK environment variable. :info:build return getattr(self, '_calc_info_{}'.format(name))() :info:build INFO: lapack_src_info: :info:build INFO: NOT AVAILABLE :info:build INFO: :info:build /opt/local/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/distutils/system_info.py:1972: UserWarning: :info:build Lapack (http://www.netlib.org/lapack/) sources not found. :info:build Directories to search for the sources can be specified in the :info:build numpy/distutils/site.cfg file (section [lapack_src]) or by setting :info:build the LAPACK_SRC environment variable. :info:build return getattr(self, '_calc_info_{}'.format(name))() :info:build INFO: NOT AVAILABLE :info:build numpy.distutils.system_info.NotFoundError: No BLAS/LAPACK libraries found. Note: Accelerate is no longer supported. :info:build To build Scipy from sources, BLAS & LAPACK libraries need to be installed. :info:build See site.cfg.example in the Scipy source directory and :info:build https://docs.scipy.org/doc/scipy/reference/building/index.html for details. Obviously, the BLAS and LPACK libraries were not found, but I don’t understand why they were not installed as dependencies by port. The problem is definitely on my side, since I could install this package in a similar computer without a hitch, but I don’t know what I did wrong. Any help on the matter would be greatly appreciated! Cheers, Artemio artem...@mac.com
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