On Feb 13, 2017, at 15:14, Murray Eisenberg wrote:

> I wrote too hastily about how I fixed XQuartz to cooperate with Inkscape (and 
> RStudio’s Rcmdr).
> 
> I think I’ve tracked down the source of the XQuartz trouble to file
> 
>     ~/.xinitrc.d/90-gnome.sh
> 
> which has contents:
> 
>     # make the freedesktop menu entries work
>     export XDG_DATA_DIRS=/opt/local/share
>     export XDG_DATA_HOME=/opt/local/share
>     export XDG_CONFIG_DIRS=/opt/local/etc/xdg
>  
>     # enable sound
>     export ESPEAKER=localhost
> 
>     # use Apple's window manager
>     exec quartz-wm &
>  
>     # start GNOME
>     exec gnome-session
> 
> (That file was installed as part of some macports gnome-related port, I 
> believe.)
> 
> That apparently interferes with XQuartz; removing that .sh file (or just 
> giving it a different extension) allows XQuartz to function normally.
> 
> Now the question is what port installed that file and what will happen 
> without the file.


I don't see any port installing that file, but I do see this wiki page 
recommending its creation:

https://trac.macports.org/wiki/GNOME

Maybe you followed those instructions at some point.

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