Ah. Okay. I don't really want that, so I instead uninstalled and reinstalled cdo without the openmpi variant.
Thanks, Matt On Sat, Aug 16, 2014 at 3:05 PM, Ryan Schmidt <ryandes...@macports.org> wrote: > > On Aug 16, 2014, at 2:02 PM, Matt Thompson wrote: > > > > Takeshi, > > > > I saw there was a new cdo port today, but when I try to upgrade it I get > (discounting the ever present DNS warning): > > The DNS warning will continue until you switch to DNS servers that work > properly :) > > > ---> Computing dependencies for cdo > > ---> Fetching archive for cdo > > Warning: Your DNS servers incorrectly claim to know the address of > nonexistent hosts. This may cause checksum mismatches for some ports. See > this page for more information: < > https://trac.macports.org/wiki/MisbehavingServers> > > ---> Attempting to fetch > cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from > http://packages.macports.org/cdo > > ---> Attempting to fetch > cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from > http://lil.fr.packages.macports.org/cdo > > ---> Attempting to fetch > cdo-1.6.4_0+grib_api+openmpi+szip.darwin_13.x86_64.tbz2 from > http://nue.de.packages.macports.org/macports/packages/cdo > > ---> Fetching distfiles for cdo > > ---> Attempting to fetch cdo-1.6.4.tar.gz from > http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/cdo > > ---> Attempting to fetch cdo-1.6.4.tar.gz from > http://distfiles.macports.org/cdo > > ---> Verifying checksums for cdo > > ---> Extracting cdo > > ---> Configuring cdo > > Error: /opt/local/bin/h5pcc not found. Install hdf5 with an mpi variant > > Error: org.macports.configure for port cdo returned: > > Please see the log file for port cdo for details: > > > > /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_cdo/cdo/main.log > > Error: Unable to upgrade port: 1 > > To report a bug, follow the instructions in the guide: > > http://guide.macports.org/#project.tickets > > > > How will I know when your patch is has been applied? Or, do I need to > run some port command to "clean out" something? > > If you ran "sudo port selfupdate", then you have already received the fix. > > As the message says, you need to install hdf5 with an mpi variant. > > -- "And, isn't sanity really just a one-trick pony anyway? I mean all you get is one trick: rational thinking. But when you're good and crazy, oooh, oooh, oooh, the sky is the limit!" -- The Tick
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