On Sat, Jan 26, 2013 at 1:30 PM, Yihui Xie <x...@yihui.name> wrote: > Please see the NEWS for knitr 1.0 (now 1.0.5): > https://github.com/yihui/knitr/blob/master/NEWS.md#changes-in-knitr-version-10 > Sweave2knitr() is a function in knitr instead of an executable in your > Ubuntu system: http://yihui.name/knitr/demo/sweave/ > > In your case, the chunk options "height=4cm, width=4cm" are invalid; > please read the documentation for chunk options: > http://yihui.name/knitr/options On one hand, there are no options > called height and width (only fig.height/fig.width or > out.height/out.width); on the other, 4cm is not a valid R object. > > To René Mayer: you also had problems after upgrading knitr, but you > did not show me examples, so I have to guess - maybe you had some > non-ASCII characters in your document, and knitr 1.0 added encoding > support; I have submitted a patch to LyX accordingly: > http://www.lyx.org/trac/ticket/8504 For now, you can download the new > lyxknitr.R from > https://raw.github.com/yihui/lyx/master/scripts/lyxknitr.R and put it > under ~/lyx/scripts/. After LyX 2.0.6 is out, you will not need it. > > Regards, > Yihui > -- > Yihui Xie <xieyi...@gmail.com> > Phone: 515-294-2465 Web: http://yihui.name > Department of Statistics, Iowa State University > 2215 Snedecor Hall, Ames, IA > > > On Sat, Jan 26, 2013 at 9:35 AM, John Kane <jrkrid...@yahoo.ca> wrote: >> I had thought that I had apa6 working nicely (I think I was wrong) and >> decided to have a go at comgining it with knitr. >> >> I successfully embedded an inline statement, then created both a table and a >> figure. (see attached file). >> Both were running fine untill I updated R yesterday >> >> I'm suddenly getting the error "It seems you are using the Sweave-specific >> sntsx; you may need to run 'Sweave2knitr('basic.knitr.attempt1.Rnw')' >> >> This gives the error : >> john@john-K53U:~/Lyx$ Sweave2knitr('basic.knitr.attempt1.Rnw') >> bash: syntax error near unexpected token `'basic.knitr.attempt1.Rnw'' >> >> I got this with a slightly larger file where I was working with the document >> class apa6 and knitr so for simplicity I striped my example down to this so >> it appears it is knitr error and not something I have done playing with >> settings to get apa6 and biblatex to work >> >> What stupid error am I making now? Or do I just have to update things? >> >> If this is the wrong mailing list can anyone point me in the right >> direction? >> Thanks >> >> LyX 2.0.4 >> >> R info >> R version 2.15.2 (2012-10-26) >> Platform: i686-pc-linux-gnu (32-bit) >> >> locale: >> [1] LC_CTYPE=en_CA.UTF-8 LC_NUMERIC=C >> [3] LC_TIME=en_CA.UTF-8 LC_COLLATE=en_CA.UTF-8 >> [5] LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_CA.UTF-8 >> [7] LC_PAPER=C LC_NAME=C >> [9] LC_ADDRESS=C LC_TELEPHONE=C >> [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C >> >> attached base packages: >> [1] grid stats graphics grDevices utils datasets methods >> base >> >> other attached packages: >> [1] lubridate_1.2.0 directlabels_2.9 RColorBrewer_1.0-5 gridExtra_0.9.1 >> [5] stringr_0.6.2 scales_0.2.3 plyr_1.8 reshape2_1.2.2 >> [9] ggplot2_0.9.3 >> >> loaded via a namespace (and not attached): >> [1] colorspace_1.2-1 dichromat_2.0-0 digest_0.6.1 gtable_0.1.2 >> [5] labeling_0.1 MASS_7.3-23 munsell_0.4 proto_0.3-10 >> [9] tools_2.15.2
John, I had to make a couple of minor changes also when moving to 1.0 but I'm glad that I was forced to make those changed. Did you get things working? If not, please post back. Scott
