I think I've fixed the LFUN and external templates now, but I get these messages when starting with a new document:
New counter already exists: part New counter already exists: part New counter already exists: part New counter already exists: chapter New counter already exists: section New counter already exists: subsection New counter already exists: subsubsection New counter already exists: paragraph New counter already exists: subparagraph New counter already exists: enumi New counter already exists: enumii New counter already exists: enumiii New counter already exists: enumiv New counter already exists: bibitem New counter already exists: figure New counter already exists: table New counter already exists: algorithm Mutex destroy failure: Device or resource busy What does these messages mean? Can it be layout files that needs updates to?