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Subject: [pyblio] open source bibliography
Date: Thu, 28 Aug 2003 11:56:15 -0700
From: Eric Zollars <[EMAIL PROTECTED]>
To: Pybliographer ML <[EMAIL PROTECTED]>

All-
Thought you might be interested. This was published in the most recent
issue of Nature. Oddly, the BibTeX format is not mentioned.

*Open-source answer to bibliography problem*

*/Sir/* –
David M. Leslie and Meredith J. Hamilton say in their Correspondence
"Multitude of reference styles delays publication" that a standard
format is needed for citation and bibliography styles. The
well-established LaTex family of open-source packages is such a system.
Many journals in the physical and mathematical sciences provide their
bibliographic style files directly on their websites, reducing the
problem of format management. Life-sciences journals could easily follow
their example.

Leslie and Hamilton repeat a familiar objection to LaTeX: the learning
curve takes away time from research work. This problem has largely been
solved in the form of an open-source graphical interface to LaTeX called
LyX (http://www.lyx.org), providing standard functionality such as
cut/paste and spell-checking. New users are relieved of the time
investment necessary for using LaTeX alone, yet they still derive its
well-known performance benefits. The Lyx interface handles standard file
formats, most significantly Adobe PDF, which many journals require for
electronic submission. It is therefore compatible with other tools used
by authors to view, share and submit their written work.

Leslie and Hamilton discuss one standardization tool, the digital object
identifier (DOI). But although there is substantial incentive for
publishers to adopt DOI for increased visibility and accessibility, the
benefits of simply changing long-established reference and citation
styles are unclear. LaTeX/LyX may represent a more realistic solution.
We hope investigators will also consider such open-source applications
in the broader context of conducting their scientific work as suggested
in your Editorial "In praise of open software"

*Michael C. Wendl* & *David J. Dooling*
/Genome Sequencing Center, Washington University, 4444 Forest Park
Boulevard, Box 8501, St Louis, Missouri 63108, USA/





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