> On 21 Jul 2024, at 18:41, Murat Yildizoglu <myi...@gmail.com> wrote:
>
>
>
>> On 21 Jul 2024, at 17:48, Murat Yildizoglu <myi...@gmail.com> wrote:
>>
>> Dear friends,
>>
>> I am importing a LaTeX file from an old LyX file after Claude translated it
>> to English from French (a very good translation of all text in French while
>> preserving the LaTeX instructions).
>>
>> The LaTeX file looks good and I can typeset it manually with pdflatex. But,
>> I want to re-edit it in LyX, and I am meeting a problem with the last
>> version of LyX 2.4.1 and MacTeX 2024 (they are not necessarily the culprit
>> but I have just updated them before doing these operations so they may be
>> relevant in my problem):
>>
>> When I compile my imported file, some elements get duplicated in the LaTeX
>> file in the temp folder. In particular, I find duplicated references and
>> bibdata and bibstyle commands in the AUX file. My LyX file has only one
>> bibliography field at the end of the document. Latex generates warnings
>> about these duplications but when I click « Show the output anyway », I get
>> a readable PDF.
>>
>> Do you know why compilation duplicates (in fact, triplicates) these elements
>> in the AUX file?
>>
>> Thank you very much!
>>
>> Murat
>
> I have solved this problem: The source was the default overlay configuration
> in my preamble. For the slide containing the Bibliography, I changed it to
> <1>, and the duplication problem has been solved, but now I have another
> problem: all references point to one of the documents I cite.
>
> FTI: I use natbib andthe authordate3 style
>
> I tried to locate the problem by hand:
>
> 0/ I delete AUX and bbl files (also the blg one)
> 1/ I pdflatex the first time: no strange errors on the logs, I get the
> standard "Package natbib Warning: Citation `XXX' on page 70 undefined on
> input line
> 377 errors and Package natbib Warning: There were undefined citations..
> The AUX file contains:
> \citation{Binmore99}
> \citation{Giraud00}
> \citation{Umbhauer02}
> and also \bibcite{} commands for them (is this normal?)
>
> 2/ I run bibtex: no errors in the blg and the bbl contains the correct
> references
> 3/ I run pdflatex again:
> Now I continue to have the citation commands but all bibcite commands point
> to the same reference:
> \bibcite{Binmore99}{{1}{1999}{{Binmore}}{{}}}
> \bibcite{Giraud00}{{2}{1999}{{Binmore}}{{}}}
> \bibcite{Umbhauer02}{{3}{1999}{{Binmore}}{{}}}
>
> and I only get this reference in the PDF of course, instead of full reference
> set.
>
> I am quite perplexed now about the potential origin of this problem and I am
> a rather obsessive guy :)
>
> Have you met this problem or do you have any idea about it?
>
> FYI information: when I switch the presentation to beamer Koma script
> document class, the references are compiled correctly.
>
> My preamble contains (but I have been using it for some time in other
> documents, but not very recently):
>
> \mode<presentation>
> {
> \usetheme{Warsaw}
> \usecolortheme{lily}
> \setbeamercovered{invisible}
> \setbeamertemplate{navigation symbols}{}
> }
> \beamerdefaultoverlayspecification{<+->}
> \AtBeginSection[]
> {
> \begin{frame}<beamer>
> \frametitle{Sections :}
> \tableofcontents[currentsection]
> \end{frame}
> }
>
> and the slides with references and the bibliography have the overlay
> specification <1> in Lyx.
>
Sorry for filling your mailbox with my messages. I just wanted to finish by
saying that the culprit is the
> \beamerdefaultoverlayspecification{<+->}
line in my preamble. When I commented it, everything got better.
I imagine that some of the defaults integrated in Beamer have changed, and my
preamble is not working as it did with the old versions of Beamer.
I am sorry for having bothered you.
Best regards,
Murat
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