The programmable versaclock is used for the usb_extal reference clock for
the EHCI driver instead of a fixed-clock.  Because the versaclock needs to
be enabled, the clock reference needs to be added to the clocks list.

For the USB3 Phy, the perferred clock reference is usb3s_clk, so
remove the usb_extal reference.

Signed-off-by: Adam Ford <aford...@gmail.com>
---
V2:  Split this off into its own patch.

diff --git a/arch/arm64/boot/dts/renesas/beacon-renesom-baseboard.dtsi 
b/arch/arm64/boot/dts/renesas/beacon-renesom-baseboard.dtsi
index a54ec36c69e4..3b3efaf749bb 100644
--- a/arch/arm64/boot/dts/renesas/beacon-renesom-baseboard.dtsi
+++ b/arch/arm64/boot/dts/renesas/beacon-renesom-baseboard.dtsi
@@ -263,12 +263,22 @@ &du_out_rgb {
 &ehci0 {
        dr_mode = "otg";
        status = "okay";
-       clocks = <&cpg CPG_MOD 703>, <&cpg CPG_MOD 704>;
+       clocks = <&cpg CPG_MOD 703>, <&cpg CPG_MOD 704>, <&versaclock5 3>;
 };
 
 &ehci1 {
        status = "okay";
-       clocks = <&cpg CPG_MOD 703>, <&cpg CPG_MOD 704>;
+       clocks = <&cpg CPG_MOD 702>, <&versaclock5 3>;
+};
+
+&gpio6 {
+
+       usb_hub_reset {
+               gpio-hog;
+               gpios = <10 GPIO_ACTIVE_HIGH>;
+               output-high;
+               line-name = "usb-hub-reset";
+       };
 };
 
 &hdmi0 {
diff --git a/arch/arm64/boot/dts/renesas/beacon-renesom-som.dtsi 
b/arch/arm64/boot/dts/renesas/beacon-renesom-som.dtsi
index ade2f58ad99b..a6f7193e4d97 100644
--- a/arch/arm64/boot/dts/renesas/beacon-renesom-som.dtsi
+++ b/arch/arm64/boot/dts/renesas/beacon-renesom-som.dtsi
@@ -75,15 +75,6 @@ &extalr_clk {
        clock-frequency = <32768>;
 };
 
-&gpio6 {
-       usb_hub_reset {
-               gpio-hog;
-               gpios = <10 GPIO_ACTIVE_HIGH>;
-               output-high;
-               line-name = "usb-hub-reset";
-       };
-};
-
 &hscif0 {
        pinctrl-0 = <&hscif0_pins>;
        pinctrl-names = "default";
@@ -315,16 +306,12 @@ &sdhi3 {
        vmmc-supply = <&reg_3p3v>;
        vqmmc-supply = <&reg_1p8v>;
        bus-width = <8>;
-       mmc-hs200-1_8v;
+       mmc-hs400-1_8v;
        non-removable;
        fixed-emmc-driver-type = <1>;
        status = "okay";
 };
 
-&usb_extal_clk {
-       clock-frequency = <50000000>;
-};
-
 &usb3s0_clk {
        clock-frequency = <100000000>;
 };
-- 
2.25.1

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