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I guess you need to "Reload Configuration" after editing the file. I never use "Reload Configuration" myself, though, as it has been a constant source of problems in the past.
Another workaround might be to switch back to "(Auto)", as long as you have at least one untouched project with the same repository left.
Yet another solution would be a small Groovy script, which calculates the correct browser URL based on the repo URL.