I think this might be a config issue, as i've ran into this before when i was trying to put multiple repos / branches on one 'Branch Specifier (blank for default)'. After 'adding another branch specifier' i haven't seen this issue but with the current version i'm working on GIT / Jenkins will only pull down the first branch i specify with no errors that i've found yet.
Caused by: hudson.plugins.git.GitException: Command "C:\Program Files (x86)\Git\cmd\git.cmd config --get remote.origin.url" returned status code 1:

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