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https://issues.apache.org/jira/browse/SOLR-17089?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17813346#comment-17813346
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Jason Gerlowski commented on SOLR-17089:
----------------------------------------
It looks like that exclusion covers "jakarta.activation" but not "jakarta.xml",
so the error message makes sense in that regard.
The dep comes into the 'extraction' module transitively through "tika-parsers":
{code}
+--- org.apache.tika:tika-parsers:1.28.5
| +--- org.apache.tika:tika-core:1.28.5 (*)
| +--- xerces:xercesImpl:2.12.2
.....[truncated]....
| +--- org.glassfish.jaxb:jaxb-runtime:2.3.5 -> 2.3.8
| | +--- jakarta.xml.bind:jakarta.xml.bind-api:2.3.3
{code}
Prior to this ticket, tika-parsers relied on a different jaxb-runtime version
that didn't have the jakarta dep. But SOLR-17089, caused our version locking
to pick a different jaxb-runtime version, which in turn now pulls in jakarta.
bq. I'd be surprised if that change was expected?
Well I definitely didn't expect it, but I'm leery of removing it. If we had a
more robust 'extraction' test suite, ideally we'd just exclude it in
{{solr/modules/extraction/build.gradle}} and lean on the tests to flush out any
problems. But as things stand I'm not confident enough in our coverage there.
Unless there are objections otherwise, I'll plan to modify smoketester to allow
this rather than modifying the build to exclude the JAR altogether.
> Extraction module causes Jersey code to throw NoClassDefFoundError
> ------------------------------------------------------------------
>
> Key: SOLR-17089
> URL: https://issues.apache.org/jira/browse/SOLR-17089
> Project: Solr
> Issue Type: Improvement
> Components: v2 API
> Affects Versions: 9.4
> Reporter: Jason Gerlowski
> Priority: Minor
> Fix For: 9.5
>
> Time Spent: 1h 20m
> Remaining Estimate: 0h
>
> (Credit to David Smiley for bringing this up and for the repro steps.)
> In certain circumstances, Jersey application initialization runs into a
> NoClassDefFoundError, usually for the "javax.activation.DataSource" class.
> From the stacktrace (see below) what appears to be happening is that Jersey
> uses this class somehow in looking for custom "MessageBodyWriter" and
> "MessageBodyReader" implementations. (MBR and MBW are two interfaces that
> Jersey provides to allow serialization/deserialization of request and
> response bodies, respectively.) Somewhere in this process, Jersey runs into
> the NoClassDefFoundError.
> It's unclear why this stacktrace only occurs with the 'extraction' jars on
> the classpath. And it's surprising that it occurs at all - classpath
> scanning and plugin "auto-detection" should be disabled in our Jersey apps
> via the "jersey.config.server.disableAutoDiscovery" and
> "jersey.config.server.disableMetainfServicesLookup" properties that are set
> on all apps.
> AFAICT, the warning and stacktrace is largely just noise. Jersey fails to
> register whatever custom component we're picking up in the "extraction" jars,
> but since we're not trying to register any components from those in the first
> place, this isn't really a problem.
> But it's still worth understanding better why this occurs and at the least
> suppressing the stack trace to avoid distracting users.
> It can be reproduced trivially with the docker command: "docker run --rm -p
> 8983:8983 -e SOLR_MODULES=extraction solr:9.4 solr-demo"
> The stacktrace/warning in the logs can be seen below:
> {code}
> 2023-11-29 15:03:58.172 WARN (coreLoadExecutor-11-thread-1) [ x:demo]
> o.g.j.i.Errors The following warnings have been detected: WARNING: HK2
> service reification failed for
> [org.glassfish.jersey.message.internal.DataSourceProvider] with an exception:
> MultiException stack 1 of 2
> java.lang.NoClassDefFoundError: javax/activation/DataSource
> at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
> at java.base/java.lang.Class.privateGetDeclaredConstructors(Unknown
> Source)
> at java.base/java.lang.Class.getDeclaredConstructors(Unknown Source)
> at org.jvnet.hk2.internal.Utilities$3.run(Utilities.java:1354)
> at org.jvnet.hk2.internal.Utilities$3.run(Utilities.java:1350)
> at java.base/java.security.AccessController.doPrivileged(Unknown Source)
> at
> org.jvnet.hk2.internal.Utilities.getAllConstructors(Utilities.java:1350)
> at
> org.jvnet.hk2.internal.Utilities.findProducerConstructor(Utilities.java:1293)
> at
> org.jvnet.hk2.internal.DefaultClassAnalyzer.getConstructor(DefaultClassAnalyzer.java:60)
> at
> org.glassfish.jersey.inject.hk2.JerseyClassAnalyzer.getConstructor(JerseyClassAnalyzer.java:124)
> at org.jvnet.hk2.internal.Utilities.getConstructor(Utilities.java:156)
> at org.jvnet.hk2.internal.ClazzCreator.initialize(ClazzCreator.java:105)
> at org.jvnet.hk2.internal.ClazzCreator.initialize(ClazzCreator.java:156)
> at
> org.jvnet.hk2.internal.SystemDescriptor.internalReify(SystemDescriptor.java:716)
> at
> org.jvnet.hk2.internal.SystemDescriptor.reify(SystemDescriptor.java:670)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.reifyDescriptor(ServiceLocatorImpl.java:442)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.narrow(ServiceLocatorImpl.java:2300)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.access$1200(ServiceLocatorImpl.java:106)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl$10.compute(ServiceLocatorImpl.java:1385)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl$10.compute(ServiceLocatorImpl.java:1380)
> at
> org.glassfish.hk2.utilities.cache.internal.WeakCARCacheImpl.compute(WeakCARCacheImpl.java:105)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetAllServiceHandles(ServiceLocatorImpl.java:1442)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1368)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1356)
> at
> org.glassfish.jersey.inject.hk2.AbstractHk2InjectionManager.getAllServiceHolders(AbstractHk2InjectionManager.java:135)
> at
> org.glassfish.jersey.inject.hk2.ImmediateHk2InjectionManager.getAllServiceHolders(ImmediateHk2InjectionManager.java:30)
> at
> org.glassfish.jersey.internal.inject.Providers.getServiceHolders(Providers.java:307)
> at
> org.glassfish.jersey.internal.inject.Providers.getCustomProviders(Providers.java:151)
> at
> org.glassfish.jersey.message.internal.MessageBodyFactory.initialize(MessageBodyFactory.java:219)
> at
> org.glassfish.jersey.message.internal.MessageBodyFactory$MessageBodyWorkersConfigurator.postInit(MessageBodyFactory.java:114)
> at
> org.glassfish.jersey.server.ApplicationHandler.lambda$initialize$2(ApplicationHandler.java:353)
> at java.base/java.util.Arrays$ArrayList.forEach(Unknown Source)
> at
> org.glassfish.jersey.server.ApplicationHandler.initialize(ApplicationHandler.java:353)
> at
> org.glassfish.jersey.server.ApplicationHandler.lambda$initialize$1(ApplicationHandler.java:297)
> at org.glassfish.jersey.internal.Errors.process(Errors.java:292)
> at org.glassfish.jersey.internal.Errors.process(Errors.java:274)
> at
> org.glassfish.jersey.internal.Errors.processWithException(Errors.java:232)
> at
> org.glassfish.jersey.server.ApplicationHandler.initialize(ApplicationHandler.java:296)
> at
> org.glassfish.jersey.server.ApplicationHandler.<init>(ApplicationHandler.java:261)
> at
> org.glassfish.jersey.server.ApplicationHandler.<init>(ApplicationHandler.java:236)
> at org.apache.solr.core.SolrCore.lambda$new$2(SolrCore.java:1158)
> at
> org.apache.solr.jersey.JerseyAppHandlerCache.lambda$computeIfAbsent$0(JerseyAppHandlerCache.java:53)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.lambda$doComputeIfAbsent$14(BoundedLocalCache.java:2688)
> at java.base/java.util.concurrent.ConcurrentHashMap.compute(Unknown
> Source)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.doComputeIfAbsent(BoundedLocalCache.java:2686)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.computeIfAbsent(BoundedLocalCache.java:2669)
> at
> com.github.benmanes.caffeine.cache.LocalCache.computeIfAbsent(LocalCache.java:112)
> at
> com.github.benmanes.caffeine.cache.LocalManualCache.get(LocalManualCache.java:62)
> at
> org.apache.solr.jersey.JerseyAppHandlerCache.computeIfAbsent(JerseyAppHandlerCache.java:53)
> at org.apache.solr.core.SolrCore.<init>(SolrCore.java:1151)
> at org.apache.solr.core.SolrCore.<init>(SolrCore.java:1056)
> at
> org.apache.solr.core.CoreContainer.createFromDescriptor(CoreContainer.java:1705)
> at
> org.apache.solr.core.CoreContainer.lambda$loadInternal$12(CoreContainer.java:1043)
> at
> com.codahale.metrics.InstrumentedExecutorService$InstrumentedCallable.call(InstrumentedExecutorService.java:234)
> at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
> at
> org.apache.solr.common.util.ExecutorUtil$MDCAwareThreadPoolExecutor.lambda$execute$0(ExecutorUtil.java:294)
> at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown
> Source)
> at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown
> Source)
> at java.base/java.lang.Thread.run(Unknown Source)
> Caused by: java.lang.ClassNotFoundException: javax.activation.DataSource
> at java.base/java.net.URLClassLoader.findClass(Unknown Source)
> at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
> at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
> at
> org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:460)
> at java.base/java.lang.ClassLoader.loadClass(Unknown Source)
> ... 59 more
> Suppressed: java.lang.ClassNotFoundException:
> javax.activation.DataSource
> at java.base/java.net.URLClassLoader.findClass(Unknown Source)
> at
> org.eclipse.jetty.webapp.WebAppClassLoader.findClass(WebAppClassLoader.java:581)
> at
> org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.java:484)
> ... 60 more
> MultiException stack 2 of 2
> java.lang.IllegalArgumentException: Errors were discovered while reifying
> SystemDescriptor(
> implementation=org.glassfish.jersey.message.internal.DataSourceProvider
>
> contracts={javax.ws.rs.ext.MessageBodyWriter,javax.ws.rs.ext.MessageBodyReader}
> scope=javax.inject.Singleton
> qualifiers={}
> descriptorType=CLASS
> descriptorVisibility=NORMAL
> metadata=
> rank=0
> loader=null
> proxiable=null
> proxyForSameScope=null
> analysisName=null
> id=91
> locatorId=1
> identityHashCode=1840961605
> reified=false)
> at
> org.jvnet.hk2.internal.SystemDescriptor.reify(SystemDescriptor.java:681)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.reifyDescriptor(ServiceLocatorImpl.java:442)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.narrow(ServiceLocatorImpl.java:2300)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.access$1200(ServiceLocatorImpl.java:106)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl$10.compute(ServiceLocatorImpl.java:1385)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl$10.compute(ServiceLocatorImpl.java:1380)
> at
> org.glassfish.hk2.utilities.cache.internal.WeakCARCacheImpl.compute(WeakCARCacheImpl.java:105)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetAllServiceHandles(ServiceLocatorImpl.java:1442)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1368)
> at
> org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1356)
> at
> org.glassfish.jersey.inject.hk2.AbstractHk2InjectionManager.getAllServiceHolders(AbstractHk2InjectionManager.java:135)
> at
> org.glassfish.jersey.inject.hk2.ImmediateHk2InjectionManager.getAllServiceHolders(ImmediateHk2InjectionManager.java:30)
> at
> org.glassfish.jersey.internal.inject.Providers.getServiceHolders(Providers.java:307)
> at
> org.glassfish.jersey.internal.inject.Providers.getCustomProviders(Providers.java:151)
> at
> org.glassfish.jersey.message.internal.MessageBodyFactory.initialize(MessageBodyFactory.java:219)
> at
> org.glassfish.jersey.message.internal.MessageBodyFactory$MessageBodyWorkersConfigurator.postInit(MessageBodyFactory.java:114)
> at
> org.glassfish.jersey.server.ApplicationHandler.lambda$initialize$2(ApplicationHandler.java:353)
> at java.base/java.util.Arrays$ArrayList.forEach(Unknown Source)
> at
> org.glassfish.jersey.server.ApplicationHandler.initialize(ApplicationHandler.java:353)
> at
> org.glassfish.jersey.server.ApplicationHandler.lambda$initialize$1(ApplicationHandler.java:297)
> at org.glassfish.jersey.internal.Errors.process(Errors.java:292)
> at org.glassfish.jersey.internal.Errors.process(Errors.java:274)
> at
> org.glassfish.jersey.internal.Errors.processWithException(Errors.java:232)
> at
> org.glassfish.jersey.server.ApplicationHandler.initialize(ApplicationHandler.java:296)
> at
> org.glassfish.jersey.server.ApplicationHandler.<init>(ApplicationHandler.java:261)
> at
> org.glassfish.jersey.server.ApplicationHandler.<init>(ApplicationHandler.java:236)
> at org.apache.solr.core.SolrCore.lambda$new$2(SolrCore.java:1158)
> at
> org.apache.solr.jersey.JerseyAppHandlerCache.lambda$computeIfAbsent$0(JerseyAppHandlerCache.java:53)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.lambda$doComputeIfAbsent$14(BoundedLocalCache.java:2688)
> at java.base/java.util.concurrent.ConcurrentHashMap.compute(Unknown
> Source)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.doComputeIfAbsent(BoundedLocalCache.java:2686)
> at
> com.github.benmanes.caffeine.cache.BoundedLocalCache.computeIfAbsent(BoundedLocalCache.java:2669)
> at
> com.github.benmanes.caffeine.cache.LocalCache.computeIfAbsent(LocalCache.java:112)
> at
> com.github.benmanes.caffeine.cache.LocalManualCache.get(LocalManualCache.java:62)
> at
> org.apache.solr.jersey.JerseyAppHandlerCache.computeIfAbsent(JerseyAppHandlerCache.java:53)
> at org.apache.solr.core.SolrCore.<init>(SolrCore.java:1151)
> at org.apache.solr.core.SolrCore.<init>(SolrCore.java:1056)
> at
> org.apache.solr.core.CoreContainer.createFromDescriptor(CoreContainer.java:1705)
> at org.apache.solr.core.CoreContainer.lambda$loadInternal$12(CoreCon...
> {code}
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