* gnu/packages/bioinformatics.scm (r-centipede): New variable.
---
gnu/packages/bioinformatics.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7d025ef..d7957cf 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -441,6 +441,27 @@ pybedtools extends BEDTools by offering feature-level
manipulations from with
Python.")
(license license:gpl2+)))
+(define-public r-centipede
+ (package
+ (name "r-centipede")
+ (version "1.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://download.r-forge.r-project.org/";
+ "src/contrib/CENTIPEDE_" version ".tar.gz"))
+ (sha256
+ (base32
+ "1hsx6qgwr0i67fhy9257zj7s0ppncph2hjgbia5nn6nfmj0ax6l9"))))
+ (build-system r-build-system)
+ (home-page "http://centipede.uchicago.edu/";)
+ (synopsis "Predict transcription factor binding sites")
+ (description
+ "Centipede fits a bayesian hierarchical mixture model to learn
+transcription-factor-specific distribution of experimental data on a
+particular cell-type for a set of candidate binding sites described by a
+genetic motif.")
+ (license (list license:gpl2+ license:gpl3+))))
+
(define-public bioperl-minimal
(let* ((inputs `(("perl-module-build" ,perl-module-build)
("perl-data-stag" ,perl-data-stag)
--
2.7.3
